Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0922
         (743 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   3.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   3.0  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    23   4.0  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   5.3  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   7.0  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   9.2  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   9.2  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   9.2  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   9.2  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 489 II*SNLSHFFSLTYPLILVT*IFIINLKF*NVLEITMC*KIFRGR-NDRDKISTCLS 656
           ++   ++HFF L  PLI      I+N +  N+ E+     I   R +DR +    LS
Sbjct: 238 LVGKKITHFFDLVRPLIAFKFHSILN-RTNNIFELVTVEPILTERPSDRQRNEILLS 293


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 735 IKKYNTNSEQRRISLVGQGCMQYKHNKRDMCLFCL 631
           IKK   ++++RR+S  G       HNK D  +  L
Sbjct: 239 IKKLTEDTQERRLSNKGSISKLQFHNKDDDLILTL 273


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +3

Query: 462 NIFNDLFIYII*SNLSHFFSLTYPLILVT*IFIINLKF*NVLEITMC*KIFRGRNDRDKI 641
           N++   +IY I SN++        ++L        LKF N+       +I+ G+  RD I
Sbjct: 40  NVYTKAYIYTIKSNMAKTLQFDVHMMLQFRYLDARLKFSNIAPYLN--QIYGGQFVRDLI 97

Query: 642 ST 647
            T
Sbjct: 98  WT 99


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 333 KLLFFSLNPETISLIRYLYLQLTYD*ISFDYLTSKY 440
           K +  + NPET+S    +  +L ++ ISF+ +   Y
Sbjct: 413 KTIMVNYNPETVSTDYDMSDRLYFEEISFEVVMDIY 448


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 726 YNTNSEQRRISLVGQGCMQYKHN 658
           YN  S+++R + +  G   YK+N
Sbjct: 43  YNFGSDEKRQAAIQSGEYNYKNN 65


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 444 YNTWTSNNQKRSNHKLIASIN 382
           YN + +NN   +N+K +   N
Sbjct: 94  YNNYNNNNYNNNNYKKLQYYN 114


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 444 YNTWTSNNQKRSNHKLIASIN 382
           YN + +NN   +N+K +   N
Sbjct: 94  YNNYNNNNYNNNNYKKLQYYN 114


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 444 YNTWTSNNQKRSNHKLIASIN 382
           YN + +NN   +N+K +   N
Sbjct: 94  YNNYNNNNYNNNNYKKLQYYN 114


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 444 YNTWTSNNQKRSNHKLIASIN 382
           YN + +NN   +N+K +   N
Sbjct: 94  YNNYNNNNYNNNNYKKLQYYN 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,561
Number of Sequences: 438
Number of extensions: 4105
Number of successful extensions: 50
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)