Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0921
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    46   3e-07
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.46 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.46 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   3.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   5.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   5.7  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   5.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   7.5  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 46.4 bits (105), Expect = 3e-07
 Identities = 47/217 (21%), Positives = 95/217 (43%), Gaps = 6/217 (2%)
 Frame = +3

Query: 111 ECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSV-TVLGLVDITLLEGQAK--GV-K 278
           +C    + +A+  ++  G+    I P++P+A+ +V +    G V +       K  G+ K
Sbjct: 42  QCIAEAVRDAVVSLAG-GLKSFKILPIEPLAVDSVKIGESQGSVTLRQEYKNIKLYGLTK 100

Query: 279 TCKFSSIKIDLEKEIGGYE-FTCDIDIEGKYKVFSESPLIKNLLGGTTVHGEGNGKVQLE 455
             +  +  ID +K I   E +   +D    YK+  +  L+        V G G   + + 
Sbjct: 101 NLEIKNYNIDWDKCILSSESYNPQVDFVADYKIEGKVLLLP-------VRGAGKSNITMY 153

Query: 456 KLQISMKFPVYAQKRD-DGEIYMKCDYSKIKYDYQILGKTKFYADNLFLGEQEASKLVTT 632
            L+      +Y +K + +GE Y++     +K++     K K   +NLF G +E  + +  
Sbjct: 154 DLKSHND--IYCEKYEKNGETYLRIKKHAVKFNP---AKVKLRFENLFDGNKELGEQMNR 208

Query: 633 FLNENWKFVMDTFGRSFFDKAMDIFYSYTSKFFGTVP 743
           F+NEN + +      ++ +    +F    ++ F  VP
Sbjct: 209 FINENSELLFKELQAAYEETFSLVFTKIDNEIFNRVP 245


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 657 VMDTFGRSFFDKAMDIFYSYTSKFFGTVPR 746
           +++ FGR FF+   D  Y    +  G  PR
Sbjct: 66  ILELFGRMFFEFCQDSGYDKILQVLGATPR 95


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 657 VMDTFGRSFFDKAMDIFYSYTSKFFGTVPR 746
           +++ FGR FF+   D  Y    +  G  PR
Sbjct: 66  ILELFGRMFFEFCQDSGYDKILQVLGATPR 95


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 379 PKALL*RTCWEARPSMAKEMEKF 447
           P+AL   T W+ RPS  +E E+F
Sbjct: 577 PRALW-PTEWKVRPSTVEEREEF 598


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 102 KDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVLGL 236
           +D +  K +++N L    ST   +  +PPV      NVSV +L L
Sbjct: 56  EDGKSDKEILDNLL---LSTRYDKRLLPPVQGTLTVNVSVLLLSL 97


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 102 KDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVLGL 236
           +D +  K +++N L    ST   +  +PPV      NVSV +L L
Sbjct: 56  EDGKSDKEILDNLL---LSTRYDKRLLPPVQGTLTVNVSVLLLSL 97


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 102 KDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVLGL 236
           +D +  K +++N L    ST   +  +PPV      NVSV +L L
Sbjct: 56  EDGKSDKEILDNLL---LSTRYDKRLLPPVQGTLTVNVSVLLLSL 97


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 366 YKVFSESPLIKNLLGGTT 419
           Y + + +PL+K L GG +
Sbjct: 115 YNITNSTPLLKKLYGGNS 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,855
Number of Sequences: 438
Number of extensions: 4550
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)