Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0921
(791 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72270.1 68414.m08355 expressed protein 30 2.0
At1g15890.1 68414.m01906 disease resistance protein (CC-NBS-LRR ... 30 2.0
At5g45610.1 68418.m05605 expressed protein 29 3.5
At1g77290.1 68414.m09001 tetrachloro-p-hydroquinone reductive de... 29 3.5
At2g25730.1 68415.m03084 expressed protein 29 4.7
At5g42180.1 68418.m05134 peroxidase 64 (PER64) (P64) (PRXR4) ide... 28 6.2
At5g06600.2 68418.m00746 ubiquitin-specific protease 12 (UBP12) ... 28 8.2
At5g06600.1 68418.m00745 ubiquitin-specific protease 12 (UBP12) ... 28 8.2
At3g16470.1 68416.m02101 jacalin lectin family protein contains ... 28 8.2
At2g26160.1 68415.m03139 F-box family protein contains F-box dom... 28 8.2
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 28 8.2
>At1g72270.1 68414.m08355 expressed protein
Length = 2777
Score = 29.9 bits (64), Expect = 2.0
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +3
Query: 192 DPIALKNVSVTVLGLVDITLLEGQAKGVKTCKFSSI-KIDLEKEIGGYEFTCDIDIEGKY 368
DP+ + VSV +L +V I +E + G+ F+S+ DL GYE T I ++
Sbjct: 2202 DPVFILRVSVQLLSMVYIEPVEFASLGLLAVAFASMSSADLGIRKLGYE-TLGIFVD--- 2257
Query: 369 KVFSESPLIKNLLGGTTVHGEGNGKVQLEKLQISMKFPVYAQKRDDGEIYMK 524
V PL + G +TV+ + ++L + V + +D +IY++
Sbjct: 2258 -VLEGIPLFHDFFGSSTVN------FRSQRLWVLRLVFVGLESEEDAQIYIR 2302
>At1g15890.1 68414.m01906 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 851
Score = 29.9 bits (64), Expect = 2.0
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +3
Query: 6 IATKMA-LMFIFLFGLIVFGDAAFVDTLGKCSLKDEECTKSLINNALNEISSTGIPELDI 182
IAT + L + LF V D + ++ L L+ + + I +AL S G+ L +
Sbjct: 625 IATSLPNLQVLKLFSSRVCIDGSLMEEL--LLLEHLKVLTATIKDALILESIQGVDRL-V 681
Query: 183 PPVDPIALKNVSVTVLGLVDITLLEGQAKGVKTCKFSSIKIDLEKEIGGYEFTC 344
+ + L+N+S V+ L + L Q + K S IKID E++ G E C
Sbjct: 682 SSIQALCLRNMSAPVIILNTVALGGLQHLEIVGSKISEIKIDWERK-GRGELKC 734
>At5g45610.1 68418.m05605 expressed protein
Length = 633
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 691 LSKKLLPKVSMTNFQFSFKNVVTSLLASCS 602
LSKKLL +N+Q KN+++ LL +CS
Sbjct: 215 LSKKLLDIWRTSNYQDPRKNLISELLLACS 244
>At1g77290.1 68414.m09001 tetrachloro-p-hydroquinone reductive
dehalogenase-related contains similarity to
tetrachloro-p-hydroquinone reductive dehalogenase
GI:148689 from [Flavobacterium sp.]
Length = 266
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 374 VFRKPSYKELVGRHDRPWRR 433
V R+PSYK+++GR+ WR+
Sbjct: 227 VRRRPSYKKVIGRYFNGWRK 246
>At2g25730.1 68415.m03084 expressed protein
Length = 2464
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 78 DTLGKCSLKDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVLGLVDITLLE 257
++ G C +++ + + +NE + G PELD V + +NV + L + L E
Sbjct: 194 ESYGTCLVEEVQGEEQ--RKEMNEATCIGSPELDNINVFALIQRNVQLAQLDAMKTKLDE 251
Query: 258 GQAKG-VKTCKFSSIKIDLEKE 320
G +G ++ + +EKE
Sbjct: 252 GDERGAADRIRYLHLDYGVEKE 273
>At5g42180.1 68418.m05134 peroxidase 64 (PER64) (P64) (PRXR4)
identical to SP|Q43872 Peroxidase 64 precursor (EC
1.11.1.7) (Atperox P64) (PRXR4) (ATP17a) {Arabidopsis
thaliana}
Length = 317
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 531 YSKIKYDYQILGKTKFYADNLFLGEQEASKLVTTFLNENWKF 656
+ I Y I GK+ F +D L KLV + N N +F
Sbjct: 247 FDNIYYKMLIQGKSLFSSDESLLAVPSTKKLVAKYANSNEEF 288
>At5g06600.2 68418.m00746 ubiquitin-specific protease 12 (UBP12)
almost identical to ubiquitin-specific protease 12
GI:11993471 [Arabidopsis thaliana], one amino acid
difference
Length = 1115
Score = 27.9 bits (59), Expect = 8.2
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 3/136 (2%)
Frame = +3
Query: 96 SLKDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVLGLVDITLLEGQAKGV 275
S+ +E TKS + + + EL+ + + K V G + L EG
Sbjct: 258 SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQ-QLFEGHHMNY 316
Query: 276 KTCKFSSIKIDLEKEIGGYEFTCDIDIEG---KYKVFSESPLIKNLLGGTTVHGEGNGKV 446
C I +D + + +D++G Y F + ++ L G H EG+G
Sbjct: 317 IEC----INVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQ 372
Query: 447 QLEKLQISMKFPVYAQ 494
+K + + FP Q
Sbjct: 373 DAKKGVLFIDFPPVLQ 388
>At5g06600.1 68418.m00745 ubiquitin-specific protease 12 (UBP12)
almost identical to ubiquitin-specific protease 12
GI:11993471 [Arabidopsis thaliana], one amino acid
difference
Length = 1116
Score = 27.9 bits (59), Expect = 8.2
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 3/136 (2%)
Frame = +3
Query: 96 SLKDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVLGLVDITLLEGQAKGV 275
S+ +E TKS + + + EL+ + + K V G + L EG
Sbjct: 259 SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQ-QLFEGHHMNY 317
Query: 276 KTCKFSSIKIDLEKEIGGYEFTCDIDIEG---KYKVFSESPLIKNLLGGTTVHGEGNGKV 446
C I +D + + +D++G Y F + ++ L G H EG+G
Sbjct: 318 IEC----INVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQ 373
Query: 447 QLEKLQISMKFPVYAQ 494
+K + + FP Q
Sbjct: 374 DAKKGVLFIDFPPVLQ 389
>At3g16470.1 68416.m02101 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase-binding protein homolog
[Arabidopsis thaliana] GI:2997767
Length = 451
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 360 GKYKVFSESPLIKNLLGGTT---VHGEGNGKVQLEKLQISMKFPVYAQKRDDGEIYMKCD 530
G Y + S +PL + GG T G G V + VY + D G +Y+K D
Sbjct: 138 GVYIIPSTTPLTPPVSGGLTKLEAQGGRGGDVWDDGGAYDNVKKVYVGQGDSGVVYVKFD 197
Query: 531 YSK 539
Y K
Sbjct: 198 YEK 200
>At2g26160.1 68415.m03139 F-box family protein contains F-box domain
Pfam:PF00646
Length = 359
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 682 SLIKPWIFSTATPRNFSARYPAKHYLTDDFTS 777
S+ KPW + ATP++F P+ + + + S
Sbjct: 32 SICKPWRSAAATPKSFQCNLPSSNKMIETVLS 63
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 411 GTTVHGEGNGKVQLEKLQISMKFPVYAQKRDDGEIYMKCDYSKIKYDYQIL 563
G + N KLQ+++ FP+ G++ +K D + ++ D +L
Sbjct: 54 GLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLTAVRSDSPLL 104
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,027,479
Number of Sequences: 28952
Number of extensions: 364252
Number of successful extensions: 1073
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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