Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0919
         (722 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0131 + 27898028-27898042,27898159-27898274,27898361-278984...    29   4.9  
01_06_0730 - 31552747-31553088,31553583-31553646,31553743-315538...    29   4.9  
01_06_0180 - 27260099-27260440,27261236-27261350,27261403-272615...    29   4.9  
02_05_0561 - 29965968-29966326,29966375-29966414,29966877-299669...    28   6.5  
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026...    28   8.6  

>05_07_0131 +
           27898028-27898042,27898159-27898274,27898361-27898424,
           27899450-27899791
          Length = 178

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = -2

Query: 580 NKSEYNHIYIRYRDFENNTHTNTKFILLK*RIKITVESIYIIKLDFLHYKIFMKHN 413
           +++ Y+++Y  YRD   N      +  +  R ++    I IIK   +H+K+  + N
Sbjct: 85  SRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDN 140


>01_06_0730 -
           31552747-31553088,31553583-31553646,31553743-31553858,
           31553964-31553978
          Length = 178

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = -2

Query: 580 NKSEYNHIYIRYRDFENNTHTNTKFILLK*RIKITVESIYIIKLDFLHYKIFMKHN 413
           +++ Y+++Y  YRD   N      +  +  R ++    I IIK   +H+K+  + N
Sbjct: 85  SRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDN 140


>01_06_0180 -
           27260099-27260440,27261236-27261350,27261403-27261518,
           27261594-27261608
          Length = 195

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = -2

Query: 580 NKSEYNHIYIRYRDFENNTHTNTKFILLK*RIKITVESIYIIKLDFLHYKIFMKHN 413
           +++ Y+++Y  YRD   N      +  +  R ++    I IIK   +H+K+  + N
Sbjct: 102 SRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDN 157


>02_05_0561 -
           29965968-29966326,29966375-29966414,29966877-29966951,
           29967003-29967107,29967453-29967592,29967691-29967775
          Length = 267

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +3

Query: 81  LLRVIGLPLLEK---PDLENAKIN*TTVSWRFKLAFVIITSTCRTAVIPAKDCESIF 242
           +LR+   P +++   P L   +++   V++ F+  + IITS C+    PAK C   F
Sbjct: 125 VLRIYCTPKVQEYSLPSLHATRLSNCPVNFEFQ-NYTIITSKCKGPRFPAKQCCDAF 180


>01_05_0117 -
           18300157-18301106,18301149-18301543,18302592-18302681,
           18303723-18303836,18303903-18304046,18316147-18316312,
           18316396-18317130,18317219-18317422,18317496-18318177,
           18318272-18318528,18318604-18319298,18319345-18319382,
           18319847-18319928,18320018-18320112,18320443-18320526,
           18320601-18320891,18321521-18321853,18321948-18322150,
           18322243-18322399,18322482-18322585,18322675-18322835,
           18323511-18323824,18324317-18324589,18324666-18324967,
           18325459-18325549,18326140-18326190,18326700-18326768,
           18326926-18327017,18327082-18327148,18328582-18328746,
           18329027-18329103,18329572-18329766,18330208-18330275,
           18331081-18331172,18331399-18331522,18331608-18331705,
           18332384-18332997,18333620-18333626
          Length = 2892

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -2

Query: 490 RIKITVESIYIIKLDFLHYKIFMKHNIQSRYILKMIMK 377
           R+K+ ++SIY + + F      +  N   RY++K+I K
Sbjct: 478 RVKLHIQSIYTVVVQFEKKSTQLLKNNGLRYLIKLIRK 515


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,064,487
Number of Sequences: 37544
Number of extensions: 241715
Number of successful extensions: 472
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)