Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0919
         (722 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.011
SB_41690| Best HMM Match : DSL (HMM E-Value=0)                         29   3.8  
SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.8  
SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.8  
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.8  
SB_39876| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.8  

>SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1186

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 131  CEDKLNN-CFLAVQARLCHYNFYVQNCCNSCKGL 229
            C+D+    C + VQAR C    Y + CC SCK L
Sbjct: 1153 CKDESKGMCMIVVQARFCTIKSYRERCCESCKNL 1186


>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
          Length = 2798

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 149  NCFLAVQARLCHYNFYVQNCCNSCK 223
            +C  A  +++CH N+Y +NC   CK
Sbjct: 1054 SCDNATGSKICHSNWYGENCTVYCK 1078


>SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 789

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 613 IIKNTVISESHNKSEYNHIYIRYRD 539
           I K  +  E+ ++++ NH+YI YRD
Sbjct: 358 ITKTKIQKETRSRTDKNHVYISYRD 382


>SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1050

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 149 NCFLAVQARLCHYNFYVQNCCNSCKGL*KYLSFYD 253
           +C +A  A++C  N+Y  NC   CK     L  Y+
Sbjct: 455 SCDMATGAKICDSNWYGLNCTRFCKPQDSLLGHYN 489


>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1870

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +2

Query: 101  PIIRETGPR----ECEDKLNNCFLAVQARLCHYNFYVQNCCNSCK 223
            P++    PR     C DK  +C    ++R C+ N+  +NC  SC+
Sbjct: 1690 PVVLTIPPRPIGLRCTDKHASCPSFAKSRRCNENWVKKNCKLSCQ 1734


>SB_39876| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 761

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +2

Query: 89  SNRPPIIRETGPRECEDKLNNCFLAVQARLCHYNFYVQ-NCCNSCK 223
           + + P      P  C D    C    +A  CH   YV+ NC  SC+
Sbjct: 644 TTQEPTTERPTPSGCSDTRKKCGAWARAGYCHRFQYVKDNCKKSCQ 689


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,355,982
Number of Sequences: 59808
Number of extensions: 312651
Number of successful extensions: 792
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)