Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0919
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.4  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   7.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = -2

Query: 166  NRQETVV---QFIFAFSRSGFSNNGRPITRSNDFLRFDSQIWR 47
            N  +TVV   QF    S+ G   N   +   N  L FD Q W+
Sbjct: 1035 NISQTVVSKAQFAMDLSQFGVLTNQHGVVTGNVQLSFDGQTWQ 1077


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 159 RKQLFSLSSHSLGPVSLIMGGRLLE 85
           R++  S ++    PVS+++ GRLLE
Sbjct: 427 RREFLSKNATFSRPVSVVLKGRLLE 451


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,053
Number of Sequences: 2352
Number of extensions: 10784
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)