Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0918
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        25   0.52 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   4.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   4.9  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 762 EYKQYTDIYTRKDYHRQMRLSSLAAQI 682
           E  QY DIYTR++  ++ +L+    Q+
Sbjct: 240 ERTQYPDIYTREELAQRTKLTEARIQV 266


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +2

Query: 293 SVTIGADTLTVSSSAGVTLNTAVQTSLVKAPPAK 394
           S T+    ++   +    L+  +QT + + PPA+
Sbjct: 88  SPTVSGSEMSSPGAGSGNLSPQIQTQVARPPPAR 121


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +2

Query: 293 SVTIGADTLTVSSSAGVTLNTAVQTSLVKAPPAK 394
           S T+    ++   +    L+  +QT + + PPA+
Sbjct: 88  SPTVSGSEMSSPGAGSGNLSPQIQTQVARPPPAR 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,575
Number of Sequences: 336
Number of extensions: 4413
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)