Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0918
         (790 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1218 - 31822915-31823141,31823418-31823832,31824090-318244...    33   0.26 
08_02_1063 + 24024030-24024506,24024803-24024856,24024965-240251...    32   0.60 
05_01_0308 + 2434642-2434736,2435176-2435245,2435435-2435566,243...    30   2.4  
07_03_1425 + 26489446-26491425                                         29   3.2  
06_01_0094 + 779097-779155,779882-781019,781732-782115,782842-78...    29   3.2  
11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348...    29   4.2  
01_06_1824 - 40146757-40147648,40150119-40150441                       29   5.6  

>04_04_1218 - 31822915-31823141,31823418-31823832,31824090-31824440,
            31825391-31825549,31825965-31826093,31826257-31826460,
            31827200-31827412,31827547-31830912,31830999-31831150,
            31831912-31832407,31832646-31833456,31833537-31834728,
            31834856-31834922
          Length = 2593

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -2

Query: 87   SSTNACPSSCNPPGTILS*PIPSELKS 7
            S  + CPS+CNP G +L  P PS LKS
Sbjct: 1833 SGVSECPSACNPTGGLLQ-PAPSILKS 1858


>08_02_1063 +
           24024030-24024506,24024803-24024856,24024965-24025118,
           24025314-24025388,24025511-24025788,24026023-24026253,
           24026522-24026620,24026740-24026889,24027830-24027976,
           24028525-24028575,24028647-24028819,24029018-24029147,
           24029361-24029458,24029655-24029892,24030634-24030837,
           24031003-24031083,24031296-24031535
          Length = 959

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
 Frame = -2

Query: 612 GSCGCC--ADGGNGRADFNFGM*ILGASKRIDPAMDLSLKVVRQLALMSPALDSKAMFWA 439
           G+CGC   A     R  F        A++R+    DL L  + +LAL  PA  ++A  W 
Sbjct: 40  GACGCLPPAPPPPRRTPFAASSASASAARRLAVPGDLLLLSLARLALRGPAPRAEARRWF 99

Query: 438 ACISNDLVGDSSTNGFAGG 382
           A +S    G     G  GG
Sbjct: 100 ASLSAASNGPPRGGGGGGG 118


>05_01_0308 +
           2434642-2434736,2435176-2435245,2435435-2435566,
           2435659-2435722,2435786-2435855,2435952-2436036,
           2437572-2437628,2437894-2438010,2438267-2438337,
           2438703-2439045
          Length = 367

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = -2

Query: 540 ASKRIDPAMDLSLKVVRQLALMSPALDSKAMFWAA---CISNDLVGDSSTNGFAGGAFTS 370
           +SK  + +++ + K+ ++++ +SP  D+K +   A   C  N L GD+  + +  G F S
Sbjct: 96  SSKSNNSSLNRTEKIYKEISFISPTNDNKRVSLVARLSCSINMLEGDTGCSLWPSGLFLS 155

Query: 369 E 367
           E
Sbjct: 156 E 156


>07_03_1425 + 26489446-26491425
          Length = 659

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -2

Query: 363 WTAVFSVTPAELETVSVSAPMVTES*PAPSSNAPLESLTS 244
           W AV++      ETV VS P V +  PA S +  L ++ S
Sbjct: 120 WAAVYATEIGSKETVRVSPPGVVDMSPAVSDSGELVAVAS 159


>06_01_0094 +
           779097-779155,779882-781019,781732-782115,782842-783060
          Length = 599

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = +1

Query: 589 ISTAPARSPSPEHLSVVCMCKRETI----PSTTAWDLRGQGGEPHLSMIIF 729
           I TAP  SP+  HL    +C R +I      T +W   G GGE  L +++F
Sbjct: 195 ILTAPLNSPN-SHL---ILCSRSSIFYWQVGTNSWTKHGYGGEHILQIVLF 241


>11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,
            3489132-3491102,3492090-3492149,3492240-3492436,
            3492678-3492963
          Length = 1143

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 592  STAPARSPSPEHL--SVVCMCKRETIPSTTAWDLRGQGGEPHLSMI 723
            +T P   P   HL  S +C C  E IP   +  ++G  GEP L  +
Sbjct: 1023 ATEPEYKPYSTHLKLSSLCFCLIEGIPLRGSKGIQGDPGEPVLQQV 1068


>01_06_1824 - 40146757-40147648,40150119-40150441
          Length = 404

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -3

Query: 683 SHAVVLGIVSRLHMHTTDKCSGDGDRAGAVLMVAMVEP 570
           S A  LG++S L + T    SG GDRA A ++  +V+P
Sbjct: 58  SGARFLGMISALDIATFVAASGVGDRAMAAVVGEVVQP 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,588,594
Number of Sequences: 37544
Number of extensions: 498796
Number of successful extensions: 1436
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)