Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0917
         (430 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089228-1|AAL89966.1|  440|Drosophila melanogaster AT02348p pro...    58   5e-09
AE014296-2761|AAF49444.1|  440|Drosophila melanogaster CG4169-PA...    58   5e-09

>AY089228-1|AAL89966.1|  440|Drosophila melanogaster AT02348p
           protein.
          Length = 440

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 30/89 (33%), Positives = 50/89 (56%)
 Frame = +1

Query: 154 LNDNAPRLKYDIISLPPQIRAVDVLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQN 333
           L DNA  +   + ++  + RA++++HKAA+R GLGNS++    ++  +SSESL  + +Q 
Sbjct: 144 LVDNAKTVVNQLNAVSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQT 203

Query: 334 ITPSRSAVTVIGDSQERAALIGQNLKLTS 420
               R+AV  +G      A   Q L+  S
Sbjct: 204 FAAGRAAVVGVGIDNNTLAGFAQTLQFPS 232



 Score = 33.9 bits (74), Expect = 0.093
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 21  GAYVSASGDREFIYYTLEATQDKLNDALEILNNLLSNQEFRPW 149
           G  ++  GDRE + YT+  T D     L  L +LL    F+PW
Sbjct: 101 GGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLL-QPAFKPW 142


>AE014296-2761|AAF49444.1|  440|Drosophila melanogaster CG4169-PA
           protein.
          Length = 440

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 30/89 (33%), Positives = 50/89 (56%)
 Frame = +1

Query: 154 LNDNAPRLKYDIISLPPQIRAVDVLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQN 333
           L DNA  +   + ++  + RA++++HKAA+R GLGNS++    ++  +SSESL  + +Q 
Sbjct: 144 LVDNAKTVVNQLNAVSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQT 203

Query: 334 ITPSRSAVTVIGDSQERAALIGQNLKLTS 420
               R+AV  +G      A   Q L+  S
Sbjct: 204 FAAGRAAVVGVGIDNNTLAGFAQTLQFPS 232



 Score = 33.9 bits (74), Expect = 0.093
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 21  GAYVSASGDREFIYYTLEATQDKLNDALEILNNLLSNQEFRPW 149
           G  ++  GDRE + YT+  T D     L  L +LL    F+PW
Sbjct: 101 GGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLL-QPAFKPW 142


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,061,694
Number of Sequences: 53049
Number of extensions: 374908
Number of successful extensions: 688
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)