Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0917
         (430 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72514-2|CAA96675.2|  422|Caenorhabditis elegans Hypothetical pr...    44   6e-05
AL161712-5|CAC70131.1|  244|Caenorhabditis elegans Hypothetical ...    27   7.5  
Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical pr...    26   10.0 
Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical p...    26   10.0 
Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical p...    26   10.0 

>Z72514-2|CAA96675.2|  422|Caenorhabditis elegans Hypothetical
           protein T10B10.2 protein.
          Length = 422

 Score = 43.6 bits (98), Expect = 6e-05
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
 Frame = +1

Query: 160 DNAPRLKYDIISLPPQIRAVDVLHKAAYRRG-LGNSLFISPKRINDISSESLQLFASQNI 336
           DN  R  YD++        VD +HKAAYR G LGNS++    +I  I + +L  FA Q+ 
Sbjct: 145 DNGYRTAYDLV--------VDQIHKAAYRNGGLGNSIYAPCSKIGSICTSTLSSFAEQHF 196

Query: 337 TPSRSAVTVIGDSQERAALIGQN 405
                 +       +   L G N
Sbjct: 197 VTGNGVLFATNAVHDDLLLYGDN 219


>AL161712-5|CAC70131.1|  244|Caenorhabditis elegans Hypothetical
           protein Y66D12A.8 protein.
          Length = 244

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +1

Query: 223 VLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPSRSAVTVI 366
           ++H A  R+G+G+  F  P+  +  SS S     S+  +  R   T++
Sbjct: 197 IVHDALKRKGIGSGKFAVPQTPSSSSSSSAAAAGSETPSVKRKRGTLL 244


>Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical
           protein F01G10.5 protein.
          Length = 824

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 1   QRKLSHMEHMLVLLETENSSIT 66
           ++KL  MEHM+  LE+EN ++T
Sbjct: 219 KKKLVDMEHMVDELESENRNLT 240


>Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical
            protein R74.1 protein.
          Length = 1186

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 308  DSDEISLILFGEMK-SELPSPRR*AALWSTSTARIWGGREIISY 180
            + D +S+++    + S+   P+   +LW    A +WG R++ISY
Sbjct: 1096 NGDSVSMVIRKMRRISKAIKPKFEVSLWRYKNA-VWGDRQMISY 1138


>Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical
            protein R74.1 protein.
          Length = 1186

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 308  DSDEISLILFGEMK-SELPSPRR*AALWSTSTARIWGGREIISY 180
            + D +S+++    + S+   P+   +LW    A +WG R++ISY
Sbjct: 1096 NGDSVSMVIRKMRRISKAIKPKFEVSLWRYKNA-VWGDRQMISY 1138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,822,705
Number of Sequences: 27780
Number of extensions: 190298
Number of successful extensions: 423
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)