Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0916
         (833 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    24   2.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.6  

>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 69  KKTGCVTFRKQYHRLYYTQTDMLPIVRVC 155
           KK  C  +RK Y+ + Y +   +P+   C
Sbjct: 97  KKLYCNNYRKLYYNINYIEQIPIPVPIYC 125


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -3

Query: 627 HKKKI--TFHLFVIS*VFCLYFFNGKTMLSLGQNASERNFDFFSY 499
           H+K I  TFHL V+     L+  N ++++   +  + + FD  +Y
Sbjct: 137 HRKLIAPTFHLNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNY 181


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,389
Number of Sequences: 438
Number of extensions: 4606
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)