Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0914
(825 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5273| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_14698| Best HMM Match : E1_DerP2_DerF2 (HMM E-Value=4.1e-31) 66 4e-11
SB_1493| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_44281| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_9571| Best HMM Match : Plasmodium_HRP (HMM E-Value=6.2) 31 1.5
SB_8486| Best HMM Match : Granulin (HMM E-Value=0) 29 3.5
SB_53331| Best HMM Match : Phage_tail_S (HMM E-Value=2.8) 28 8.0
SB_33291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_3682| Best HMM Match : efhand (HMM E-Value=7.4e-05) 28 8.0
>SB_5273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/125 (30%), Positives = 66/125 (52%)
Frame = +3
Query: 75 MLFFITAAVLLASAEAKFFKDCGSKLATVHNVTVSGCEESSSHCILKRNTDATIGLQFTP 254
++F A ++ +S + ++DCGS+ + + +S C+ S C+LKR T L F P
Sbjct: 7 VVFAFAAMLVPSSTKTIKYRDCGSQEGEIVGMDISPCD--SEPCVLKRGTSVDGSLTFIP 64
Query: 255 LHNIDRINTEVHGVIMNIPIPFPLPESDACKDNGLTCPLKEGTLADYKATLPILKSYPKV 434
++ R H +I +P+P P+P SDAC+ GL+CP+ G + +K I +P
Sbjct: 65 HEDLKRAKLSAHAIIDKLPLPLPIP-SDACQGYGLSCPVDSGVKSMFKIHQAIESEFPVG 123
Query: 435 TVEVK 449
+ +K
Sbjct: 124 NLTLK 128
>SB_14698| Best HMM Match : E1_DerP2_DerF2 (HMM E-Value=4.1e-31)
Length = 167
Score = 65.7 bits (153), Expect = 4e-11
Identities = 32/118 (27%), Positives = 55/118 (46%)
Frame = +3
Query: 129 FKDCGSKLATVHNVTVSGCEESSSHCILKRNTDATIGLQFTPLHNIDRINTEVHGVIMNI 308
FK C S + + + CEE C + ++ T F P + EV G+I +
Sbjct: 25 FKACESPAGKLIELDLEPCEEEP--CTFHKGSNETCKATFVPNELVSSATIEVFGIIGGV 82
Query: 309 PIPFPLPESDACKDNGLTCPLKEGTLADYKATLPILKSYPKVTVEVKWELQSEHGDLV 482
+PFPL + C+++G+ CP+ G A + + YP + + +K+EL+ LV
Sbjct: 83 QVPFPLKNPNVCENHGVKCPINAGDSATLDLNIYVSNLYPSLKLIIKFELKGGDNKLV 140
>SB_1493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 270 RINTEVHGVIM--NIPIPFPLPESDACKDNGLTCPLKEGTLADYKATLPILKSYPKVTVE 443
RI+ V+ V+ N + P+ S N + C +K + + P+ + V VE
Sbjct: 395 RIDPLVNDVLQWTNASLGRPVDVSQTSNGNAVACQVKAINMTVRELVKPMFSACADVCVE 454
Query: 444 VKWELQSEHGDLV 482
V WE +SEH LV
Sbjct: 455 VSWE-ESEHQCLV 466
>SB_44281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 206 YTEEKHRRHDRPAVYTTAQHRSHKYRSSRGHHEHPDTV 319
+T R H T+ QH H +SR HHEH T+
Sbjct: 142 HTNIVSRTHHYNITNTSLQHHEHITTTSRTHHEHITTI 179
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 224 RRHDRPAVYTTAQHRSHKYRSSRGHHEHPDTV 319
R H T+ QH H SR HHEH T+
Sbjct: 181 RTHHYNITNTSLQHHEHITTISRTHHEHITTI 212
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 224 RRHDRPAVYTTAQHRSHKYRSSRGHHEHPDTV 319
R H T+ QH H SR HHEH T+
Sbjct: 214 RTHHYNITNTSLQHHEHITTISRTHHEHITTI 245
>SB_9571| Best HMM Match : Plasmodium_HRP (HMM E-Value=6.2)
Length = 225
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 206 YTEEKHRRHDRPAVYTTAQHRSHKYRSSRGHHEHPDTV 319
+T R H T+ QH H +SR HHEH T+
Sbjct: 75 HTNIVSRTHHYNITNTSLQHHEHITTTSRTHHEHITTI 112
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 224 RRHDRPAVYTTAQHRSHKYRSSRGHHEHPDTV 319
R H T+ QH H SR HHEH T+
Sbjct: 114 RTHHYNITNTSLQHHEHITTISRTHHEHITTI 145
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 224 RRHDRPAVYTTAQHRSHKYRSSRGHHEHPDTV 319
R H T+ QH H SR HHEH T+
Sbjct: 147 RTHHYNITNTSLQHHEHITTISRTHHEHITTI 178
>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
Length = 878
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Frame = +3
Query: 321 PLPESDACKD------NGLTCPLKEGTLADYKATLPILKSYP 428
PLP + C D NG TC GT ++ + LP+ K P
Sbjct: 372 PLPNAVCCDDGVHCCPNGYTCNSSSGTCSEGDSVLPLFKKTP 413
>SB_53331| Best HMM Match : Phage_tail_S (HMM E-Value=2.8)
Length = 171
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 351 NGLTCPLKEGTLADYKATLPILKSYPKVTVEV 446
N + +KEGTL D++ATLP Y + VE+
Sbjct: 53 NKMYVAVKEGTLTDFRATLP--SHYLGINVEL 82
>SB_33291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1227
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 164 QRDGERMRRVVQSLYTEEKHRRHDRPAVYTTAQHRSHKYRSSRG-HHEHPDTVP 322
+RD + + T H H+ TT H H+ R HHEH +T+P
Sbjct: 397 RRDSDVNDETEGDVVTRTTHLEHENTIPRTT--HHEHENTIPRTTHHEHENTIP 448
>SB_3682| Best HMM Match : efhand (HMM E-Value=7.4e-05)
Length = 340
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 351 NGLTCPLKEGTLADYKATLPILKSYPKVTVEV 446
N + +KEGTL D++ATLP Y + VE+
Sbjct: 53 NKMYVAVKEGTLTDFRATLP--SHYLGINVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,388,308
Number of Sequences: 59808
Number of extensions: 504062
Number of successful extensions: 1279
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2311562737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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