Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0911
(774 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17503| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 8e-41
SB_40001| Best HMM Match : DUF1279 (HMM E-Value=0.7) 33 0.34
SB_12657| Best HMM Match : Helicase_C (HMM E-Value=1.2e-10) 31 0.78
SB_58835| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06) 30 1.8
SB_42714| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 28 7.3
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_18834| Best HMM Match : FlgM (HMM E-Value=4.7) 28 7.3
SB_11059| Best HMM Match : KID (HMM E-Value=0.046) 28 9.6
>SB_17503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 164 bits (398), Expect = 8e-41
Identities = 78/105 (74%), Positives = 92/105 (87%)
Frame = +1
Query: 373 KKDNVAGVTLPIFESYQDGSDTYELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFV 552
+KDNVAGV LPIFE DG+++YEL GL+RGGQQL+K ++ + AVKLLVELASLQTSFV
Sbjct: 2 RKDNVAGVLLPIFEPVSDGTNSYELTGLSRGGQQLSKCQEVYGKAVKLLVELASLQTSFV 61
Query: 553 TLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 687
TLDE IK+TNRRVNAIEHVIIPR+E T++YI+ ELDE EREEFYR
Sbjct: 62 TLDEAIKLTNRRVNAIEHVIIPRIENTVSYILGELDEREREEFYR 106
>SB_40001| Best HMM Match : DUF1279 (HMM E-Value=0.7)
Length = 297
Score = 32.7 bits (71), Expect = 0.34
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Frame = +1
Query: 271 KEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNV--AGVTLPIFESYQDGS---D 435
+ A + AE FTT D N+ +++ + + K ++ N+ G T P +DG D
Sbjct: 58 RSAKQTTAETSFTTEDLNENLIRFQSDRRGKTLTQLRNLDKGGWTKPRQLFNEDGGVRQD 117
Query: 436 TYELAGLARGGQQLAKLKKNFQSAVKLLVELASL-QTSFVTLDEVIKITNRRVNAIEHVI 612
+L G +AK+ Q + + EL + T T+D+ +RR A E
Sbjct: 118 VAKLKGFKLAMGSVAKIDTVIQENTERVQELQGVVATDRETIDDPNTSESRRQEARE--- 174
Query: 613 IPRLERTLAYIISELDELERE 675
R E L SE+DELERE
Sbjct: 175 --RNEERL----SEIDELERE 189
>SB_12657| Best HMM Match : Helicase_C (HMM E-Value=1.2e-10)
Length = 228
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 79 IKMSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRM---ILSKIIETK 249
I+MSG+ RG +LI G G GLLK AD L F + ++ ++ +
Sbjct: 105 IQMSGRAGRRGLDERGIVILIIDEKMGPDVGKGLLKGHADPLNSAFHLTYNMVLNLLRVE 164
Query: 250 TLMGEVMKEAAF 285
+ E+M E +F
Sbjct: 165 EINPEIMLEKSF 176
>SB_58835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 30.3 bits (65), Expect = 1.8
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Frame = +1
Query: 292 AEAKFTTGDFNQ--VVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLAR- 462
AE FTT D N+ + Q+ + + I+ + + G T P ++G ++A L R
Sbjct: 53 AETSFTTEDLNENLIQFQSDRRGETLIQLRNLDKGGWTKPKQLFNENGGVRQDVAKLKRF 112
Query: 463 --GGQQLAKLKKNFQSAVKLLVELASL-QTSFVTLDEVIKITNRRVNAIEHVIIPRLERT 633
+A++ Q + + EL + T T+D+ +RR A E ER
Sbjct: 113 KAAMMSVAEIDAVIQENTERVQELQGVVATDRETIDDPNTSESRRQEARER----NEER- 167
Query: 634 LAYIISELDELERE 675
ISE+DELERE
Sbjct: 168 ----ISEIDELERE 177
>SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06)
Length = 781
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 444 VGWFGPWWAAACKAEEEL 497
VGWF P W AC AE +L
Sbjct: 341 VGWFAPPWVRACMAEYQL 358
>SB_42714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 969
Score = 28.7 bits (61), Expect = 5.5
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 439 YELAGLARGGQQLAKLKKNFQSAVKLLVEL-ASLQTSFVTLDEVIKITNRRVNAIEHVII 615
Y L R QQ K K F+ A+ + EL ++ T T+D+ +RR A E
Sbjct: 782 YPLFNKDRSIQQYVKNLKGFKLAIGPVAELQGAVATDRETIDDPNTPDSRRQEARE---- 837
Query: 616 PRLERTLAYIISELDELERE 675
R E L SE+DELERE
Sbjct: 838 -RNEERL----SEIDELERE 852
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 525 LDQKLYSALEVLLQLCKLLPTTGQTSQLVGIRTILV 418
+D + SA+E+ + C+ + T T L+GI T+L+
Sbjct: 659 VDDLMTSAIELAMNECRWIKTDKSTLILIGIFTVLI 694
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +1
Query: 469 QQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYII 648
Q+L++L+KN +S VKL E + + L +I ++++N ++ I E+ ++
Sbjct: 745 QKLSELEKNEESLVKLASEAKKVLSEKQELSILINGISKKLNNLKE-ITSHFEKRELFLT 803
Query: 649 SELDELER 672
++ LER
Sbjct: 804 QKVLRLER 811
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 469 QQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLA 639
QQL+KL + S +L LASLQ + + + E K V+ + H I +R +A
Sbjct: 604 QQLSKLNAEYMSLCQLKTMLASLQNAGMGIIEKNKDDPTTVDELTHKIQEVTDRYVA 660
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -2
Query: 605 CSMALTRLFVILITSSRVTNEVCSEANSTKSFTALWKFFFSFASCCPP 462
CS A T LF S RV + VCS + FT L+ F C P
Sbjct: 958 CSRAFTSLFACFPMSVRVCSPVCS-----RVFTCLFACFHLSVRVCSP 1000
>SB_18834| Best HMM Match : FlgM (HMM E-Value=4.7)
Length = 233
Score = 28.3 bits (60), Expect = 7.3
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Frame = +1
Query: 142 KGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFSLAEAKFTTGDF 321
K +L A+ + L K K ++++ +K K + A + LA+AK+ +
Sbjct: 43 KSKLQLAIAKYKLAKAKYKLANAKYKLAKAKYKPAKAKYK--LANAKYKLAKAKYKLANA 100
Query: 322 NQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLARGGQQLAKLKKNFQ 501
+ KA+ K+ K A Y+ Y+LA LA +LAK K
Sbjct: 101 KY----KLAKAKYKVAKAKYKFANA------KYKLAKAKYKLAKLAIAKYKLAKAKYKLA 150
Query: 502 SA-VKLLVELA 531
+A KL+V +A
Sbjct: 151 NAKYKLVVLIA 161
>SB_11059| Best HMM Match : KID (HMM E-Value=0.046)
Length = 296
Score = 27.9 bits (59), Expect = 9.6
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 442 ELAGLARGGQQLAKLKKNFQSAV-KLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 618
E+ L R Q ++ + Q A+ + +E+ SL TL + N N++ I
Sbjct: 135 EIDALKRALQDQDQVMEEQQDALTERQLEIESLTEELRTLTD----QNTSTNSLS-AEIR 189
Query: 619 RLERTLAYIISELDELERE 675
RLE TL+ I E D+L+RE
Sbjct: 190 RLEGTLSVYIKEKDQLQRE 208
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,913,658
Number of Sequences: 59808
Number of extensions: 448529
Number of successful extensions: 1303
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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