Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0910
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73972-3|CAA98259.1|  305|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U41542-8|AAN39682.1|  437|Caenorhabditis elegans Protein disulfi...    28   8.0  
U41542-6|AAK39152.1|  493|Caenorhabditis elegans Protein disulfi...    28   8.0  
AF154004-1|AAD38186.1|  330|Caenorhabditis elegans cyclin-depend...    28   8.0  
AF003386-7|AAB54258.2|  412|Caenorhabditis elegans Hypothetical ...    28   8.0  
AC024766-2|AAK68887.2|  330|Caenorhabditis elegans Cyclin-depend...    28   8.0  

>Z73972-3|CAA98259.1|  305|Caenorhabditis elegans Hypothetical
           protein F15H10.6 protein.
          Length = 305

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
 Frame = -1

Query: 181 NLLFI-FKTDYLEDKYQLLEISGLKLNNLPKSRLI*EK 71
           N+L+I  + DY E+  +LL  SG+ LN++P +R++ E+
Sbjct: 40  NMLYIPDEFDYYEEPVELLFDSGMSLNHVPVTRILEEE 77


>U41542-8|AAN39682.1|  437|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform b protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 178 LLFIFKTDYLEDKYQLLEISGLKLNNLPKSRLI 80
           +LF++    +E+  +++E  GLK + LP  RLI
Sbjct: 226 VLFVYINTDVEENARIMEFFGLKKDELPAIRLI 258


>U41542-6|AAK39152.1|  493|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform a protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 178 LLFIFKTDYLEDKYQLLEISGLKLNNLPKSRLI 80
           +LF++    +E+  +++E  GLK + LP  RLI
Sbjct: 282 VLFVYINTDVEENARIMEFFGLKKDELPAIRLI 314


>AF154004-1|AAD38186.1|  330|Caenorhabditis elegans cyclin-dependent
           kinase 7 homolog protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = -2

Query: 678 GGKVTLSSLYSGRKTELSA*VGEKEVLLVFVHTKSTLCQLKFGLIYL 538
           G + ++  ++    T+L   + +KE++L+  H K+   Q+  GL +L
Sbjct: 75  GHRTSIQLVFDFMDTDLEHVIKDKEIILMPAHIKNITMQMLLGLEFL 121


>AF003386-7|AAB54258.2|  412|Caenorhabditis elegans Hypothetical
           protein F59E12.8 protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 6   TLCFSEQLLISQCCLRFSILVFFS*INLDLGKLFNF 113
           TL    +L+I +      I+VF+  +NLD GK+F F
Sbjct: 336 TLFLIAELVIGKTDFLTHIVVFYRTLNLDYGKIFFF 371


>AC024766-2|AAK68887.2|  330|Caenorhabditis elegans Cyclin-dependent
           kinase familyprotein 7 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = -2

Query: 678 GGKVTLSSLYSGRKTELSA*VGEKEVLLVFVHTKSTLCQLKFGLIYL 538
           G + ++  ++    T+L   + +KE++L+  H K+   Q+  GL +L
Sbjct: 75  GHRTSIQLVFDFMDTDLEHVIKDKEIILMPAHIKNITMQMLLGLEFL 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,783,818
Number of Sequences: 27780
Number of extensions: 326115
Number of successful extensions: 721
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)