Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0909
         (721 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q74N94 Cluster: NEQ120; n=1; Nanoarchaeum equitans|Rep:...    35   1.8  
UniRef50_Q559U4 Cluster: Putative uncharacterized protein; n=2; ...    33   7.1  
UniRef50_Q8STY4 Cluster: Similarity to HYPOTHETICAL INTEGRAL MEM...    33   9.4  

>UniRef50_Q74N94 Cluster: NEQ120; n=1; Nanoarchaeum equitans|Rep:
           NEQ120 - Nanoarchaeum equitans
          Length = 255

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -1

Query: 520 SNEYRFYTPPLLKHLTFSCGPNSIVFRSFTQNFRIRSLKQKYIQKYTLEIL 368
           SN   FY   + K  +  C PN IV  +F  +++I SLK + +   +  IL
Sbjct: 174 SNNDNFYNLTVFKEWSLYCKPNKIVLGAFVNSYKIYSLKIRCLTSCSANIL 224


>UniRef50_Q559U4 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 629

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -1

Query: 496 PPLLKHLTFSCGPNSIVFRSFTQNFRIRSLKQKYIQKYTLEILLCYN 356
           P  LKHL+ SC  +    + F +N  + SL+  Y+  YT ++LL Y+
Sbjct: 323 PTTLKHLSISCSQSLRNLKPFLKN--LESLELTYVLLYTKKLLLQYD 367


>UniRef50_Q8STY4 Cluster: Similarity to HYPOTHETICAL INTEGRAL
           MEMBRANE PROTEIN YJJ1_YEAST; n=1; Encephalitozoon
           cuniculi|Rep: Similarity to HYPOTHETICAL INTEGRAL
           MEMBRANE PROTEIN YJJ1_YEAST - Encephalitozoon cuniculi
          Length = 421

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
 Frame = -1

Query: 457 NSIVFRSFTQNFRIRSLK-QKYIQKYTLEILLCYNLQLT 344
           + IVF  F++ F+IR+L+  ++I KY L IL+  N+ +T
Sbjct: 338 HGIVFEVFSRTFKIRNLEMHRFISKYLLFILVWSNMLVT 376


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,177,207
Number of Sequences: 1657284
Number of extensions: 11094821
Number of successful extensions: 19216
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19212
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)