Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0909
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis...    31   1.1  
AF063007-1|AAC16430.2|  730|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical p...    29   4.4  

>U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis
           transmembrane conductanceregulator homolog protein 1
           protein.
          Length = 1247

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 125 SLWCKTFWREPEVSSCVNY-FILSM*LYNVEAGLSSRRSFTYSV 253
           S W    W++ E  +C  Y FI +M  + + A +S+  S+T+ V
Sbjct: 714 SFWLDPVWKKVECENCPQYVFIQTMSFFAISAIISTMLSYTFFV 757


>AF063007-1|AAC16430.2|  730|Caenorhabditis elegans Hypothetical
           protein R119.1 protein.
          Length = 730

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/73 (27%), Positives = 32/73 (43%)
 Frame = -1

Query: 553 QRHKRKVVYYVSNEYRFYTPPLLKHLTFSCGPNSIVFRSFTQNFRIRSLKQKYIQKYTLE 374
           Q   R +   V  EYR Y+PP  ++LT      S++      NF+++S+       Y+L 
Sbjct: 545 QNFNRFLDNLVPLEYRLYSPPKRENLTDHVKTISMIITMKKPNFKVKSITDLLNTPYSLH 604

Query: 373 ILLCYNLQLTSEF 335
                NL    +F
Sbjct: 605 QHDIGNLNRLQQF 617


>Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical
           protein F14F8.13 protein.
          Length = 328

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 398 IYTEIYFGDSSLL*SATYL*ISIYLFCFCCYILREFLF*FLITIL 264
           I  +  FG + +L  A YL   +  FC  CYI+      F+I++L
Sbjct: 160 ILKDAVFGTACVLSLAKYLNEEVSEFCIVCYIILFAFLNFVISVL 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,212,269
Number of Sequences: 27780
Number of extensions: 276464
Number of successful extensions: 500
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)