Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0908
         (400 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2VTE8 Cluster: Pannexin 7; n=2; Aplysia californica|Re...    33   2.7  
UniRef50_Q73GB2 Cluster: Sodium/alanine symporter family protein...    32   4.8  
UniRef50_Q388H3 Cluster: Putative uncharacterized protein; n=1; ...    31   6.3  
UniRef50_Q7VIR5 Cluster: Putative uncharacterized protein; n=1; ...    31   8.3  

>UniRef50_Q2VTE8 Cluster: Pannexin 7; n=2; Aplysia californica|Rep:
           Pannexin 7 - Aplysia californica (California sea hare)
          Length = 423

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +3

Query: 141 LTTHGVLTINKITTASFLAGLPEPL--FLFTYLIKIPLLFYYGLCTY 275
           +TT+G  T N  ++  + A +  PL  F+F  LIK+P L +Y + T+
Sbjct: 111 VTTNGSETFNLDSSDQYFASVTVPLVLFIFALLIKLPHLVWYLMSTF 157


>UniRef50_Q73GB2 Cluster: Sodium/alanine symporter family protein;
           n=5; Wolbachia|Rep: Sodium/alanine symporter family
           protein - Wolbachia pipientis wMel
          Length = 447

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = +3

Query: 135 SVLTTHGVLTINKITTASFLAGLPEPLFLFTYLIKIPLLFYYGLCTYIIYLH 290
           ++L  +  + I+ +     L G+    F+ T L  I ++ Y G+C Y+IY++
Sbjct: 183 NLLEYNASIIISLLVFIVILGGIKRIAFVSTSLAPIMIVLYVGMCIYLIYVN 234


>UniRef50_Q388H3 Cluster: Putative uncharacterized protein; n=1;
          Trypanosoma brucei|Rep: Putative uncharacterized
          protein - Trypanosoma brucei
          Length = 114

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +3

Query: 3  LHTHTHTYIFLFTDFT 50
          L+THTHT+IF+F DF+
Sbjct: 25 LYTHTHTHIFVFPDFS 40


>UniRef50_Q7VIR5 Cluster: Putative uncharacterized protein; n=1;
           Helicobacter hepaticus|Rep: Putative uncharacterized
           protein - Helicobacter hepaticus
          Length = 687

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +3

Query: 174 ITTASFLAGLPEPLFLFTY--LIKIPLLFYYGLCTYII 281
           +   +FL G    +F+  Y  +I+IPLL +Y +CT I+
Sbjct: 214 LNEVNFLLGFASFVFVLLYFVIIRIPLLTFYTICTLIL 251


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,726,771
Number of Sequences: 1657284
Number of extensions: 6746162
Number of successful extensions: 21777
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20219
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)