Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0908
         (400 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated p...    27   6.5  
AY741200-1|AAU89102.1|  596|Caenorhabditis elegans STE20-like se...    27   6.5  
AL132898-15|CAC14417.2|  596|Caenorhabditis elegans Hypothetical...    27   6.5  
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr...    26   8.7  
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c...    26   8.7  

>L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated
           protein 36 protein.
          Length = 1249

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +1

Query: 31  FYSLILQDMEYVD---GVLKNCGRMLRGEHIINVY 126
           +Y+L LQD +Y+D    + ++ G +L  EH    Y
Sbjct: 836 YYNLTLQDYDYIDPYWSIFEHIGHLLSIEHAQESY 870


>AY741200-1|AAU89102.1|  596|Caenorhabditis elegans STE20-like
           serine/threonine kinase protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 4   CTHTHTHTFFYSLILQDMEYVDGVLKNCGRML 99
           C H +  +++ S I Q+  +V   L NCG ML
Sbjct: 161 CNHPNVVSYYTSFIAQEELWVVMRLLNCGSML 192


>AL132898-15|CAC14417.2|  596|Caenorhabditis elegans Hypothetical
           protein Y59A8B.23 protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 4   CTHTHTHTFFYSLILQDMEYVDGVLKNCGRML 99
           C H +  +++ S I Q+  +V   L NCG ML
Sbjct: 161 CNHPNVVSYYTSFIAQEELWVVMRLLNCGSML 192


>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical protein
            C48B4.4c protein.
          Length = 1704

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 242  SIIILLWFMYVYNIFTHVYYTTF 310
            +I+IL WF+Y ++    +Y  +F
Sbjct: 1201 AIVILFWFLYFFSSVPFIYAVSF 1223


>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical protein
            C48B4.4b protein.
          Length = 1691

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 242  SIIILLWFMYVYNIFTHVYYTTF 310
            +I+IL WF+Y ++    +Y  +F
Sbjct: 1188 AIVILFWFLYFFSSVPFIYAVSF 1210


>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical protein
            C48B4.4a protein.
          Length = 1689

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 242  SIIILLWFMYVYNIFTHVYYTTF 310
            +I+IL WF+Y ++    +Y  +F
Sbjct: 1186 AIVILFWFLYFFSSVPFIYAVSF 1208


>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
            cassette transporter protein.
          Length = 1704

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 242  SIIILLWFMYVYNIFTHVYYTTF 310
            +I+IL WF+Y ++    +Y  +F
Sbjct: 1201 AIVILFWFLYFFSSVPFIYAVSF 1223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,950,272
Number of Sequences: 27780
Number of extensions: 176333
Number of successful extensions: 382
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)