Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0908
         (400 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   2.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   5.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   6.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -3

Query: 131 HAYTLIMCSPRSIRPQFFSTPSTYSMSCKISE*KNVCVCVCVQ 3
           H  + +  S RSI P   S        C++S    + VCVC++
Sbjct: 67  HEESYLAESSRSIDP-CASKYCGIGKECELSPNSTIAVCVCMR 108


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 34  YSLILQDMEYVDGVLKNCGRMLRGEHIINVY 126
           Y L  +++    G+L+N     RGE I  +Y
Sbjct: 57  YGLRFEEVSEKYGILQNWMDKFRGEEIAILY 87


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 46  LQDMEYVDGVLKNCGRM 96
           +++MEY+D V K   RM
Sbjct: 350 IKEMEYLDKVFKETLRM 366


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 213 LFLFTYLIKIPLLFYY 260
           +F F+Y I + L+ YY
Sbjct: 215 IFTFSYCIPMILIIYY 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,065
Number of Sequences: 438
Number of extensions: 2327
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)