Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0906
(720 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46476| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_12959| Best HMM Match : Peptidase_M16_C (HMM E-Value=1e-14) 34 0.10
SB_16224| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_36390| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_55702| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_45715| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_19455| Best HMM Match : Amino_oxidase (HMM E-Value=0.0003) 28 6.6
SB_18583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_14735| Best HMM Match : Sushi (HMM E-Value=1.8e-07) 28 6.6
SB_8179| Best HMM Match : zf-B_box (HMM E-Value=0.28) 28 6.6
SB_53446| Best HMM Match : Neur_chan_memb (HMM E-Value=0.038) 28 6.6
>SB_46476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 50.0 bits (114), Expect = 2e-06
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Frame = +1
Query: 25 AYVSASGDREFIYYT--LEATQDKL----NDALEILNNLVSNQEFRPWELNDNAPRLKYD 186
A VS + F Y T L T L + A++IL +++ N E+ + +
Sbjct: 4 AMVSRLASKRFSYLTNVLSKTHQLLMVLYSSAVDILADIIQNSTLGEAEIERERGVILRE 63
Query: 187 IISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKRINDISSESLQLFASQNITPSRCAV 357
+ + Q+ V D LH AY+ LG ++ + + I+ + L+ + +++ + R +
Sbjct: 64 MQEVDTQLEEVVFDHLHATAYQGTALGRTILGPSRNVKSITQQDLKDYINKHYSAPRMVL 123
Query: 358 TVIGD-SQERAALIVQN----LKLTSSDASQAEASTYYGGELR-KEIGGDLAHVALAVQG 519
G + + + +N L+ T + + E + G E+R ++ LAHVA++V+G
Sbjct: 124 AAAGGVNHDDLVKLAENHFSGLRSTYEEQDKVEPCRFSGSEIRVRDDDMPLAHVAMSVEG 183
Query: 520 APAGSPQXXXXXXXXXXXGNGPVTKWGADN--SPLAKAIG-NIGPFAAAGFNVSYSDNGL 690
P G+ + N S LA+ I N FN Y+D GL
Sbjct: 184 CGWTHPDYFALMVANMLVGSWDRSFSAGKNIGSKLAQQIAQNNLAHNFMSFNTCYTDTGL 243
Query: 691 FGV 699
+G+
Sbjct: 244 WGI 246
>SB_12959| Best HMM Match : Peptidase_M16_C (HMM E-Value=1e-14)
Length = 593
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 640 GPFAAAGFNVSYSDNGLFG 696
GPFA + N+SYSD+GLFG
Sbjct: 287 GPFAVSALNMSYSDSGLFG 305
>SB_16224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1127
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 229 HKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQERAALIVQNL 408
+K RG L K+ N + S+ Q + + P + + ERA +++N+
Sbjct: 610 NKVLLSRGEAALLLSQQKQANAVKSKGKQWSKGKGVVPGVLSEGKAKEGLERARQLIKNM 669
Query: 409 KLTSSDASQAEAST 450
+ S A++A+AST
Sbjct: 670 RSLESKAAEAKAST 683
>SB_36390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +1
Query: 226 LHKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQERAALIVQN 405
LH A RR S I+ R + ES+++ A QN+ PSR A Q A
Sbjct: 83 LHMDA-RRKESRSDIIAKNRSLTLDGESIRITAKQNVPPSRSAQFAGQSIQITAIATKTK 141
Query: 406 LKLTSSDASQAEAS 447
K T++ S+ S
Sbjct: 142 SKTTTTPTSRTPTS 155
>SB_55702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 282 LWRDEERVTQSTTIGCLMEQIYSTNLG 202
LWRDE R T+ T+G + ST++G
Sbjct: 45 LWRDENRRTRRKTLGAKVRPTNSTHVG 71
>SB_45715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 282 LWRDEERVTQSTTIGCLMEQIYSTNLG 202
LWRDE R T+ T+G + ST++G
Sbjct: 70 LWRDENRRTRRKTLGAKVRPTNSTHVG 96
>SB_19455| Best HMM Match : Amino_oxidase (HMM E-Value=0.0003)
Length = 658
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 282 LWRDEERVTQSTTIGCLMEQIYSTNLG 202
LWRDE R T+ T+G ST++G
Sbjct: 599 LWRDENRRTRRKTLGAKARPTNSTHVG 625
>SB_18583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 282 LWRDEERVTQSTTIGCLMEQIYSTNLG 202
LWRDE R T+ T+G ST++G
Sbjct: 57 LWRDENRRTRRKTLGAKARPTNSTHVG 83
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 282 LWRDEERVTQSTTIGCLMEQIYSTNLG 202
LWRDE R T+ T+G ST++G
Sbjct: 1248 LWRDENRRTRRKTLGAKARPTNSTHVG 1274
>SB_14735| Best HMM Match : Sushi (HMM E-Value=1.8e-07)
Length = 305
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 282 LWRDEERVTQSTTIGCLMEQIYSTNLG 202
LWRDE R T+ T+G ST++G
Sbjct: 77 LWRDENRRTRRKTLGAKARPTNSTHVG 103
>SB_8179| Best HMM Match : zf-B_box (HMM E-Value=0.28)
Length = 336
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 282 LWRDEERVTQSTTIGCLMEQIYSTNLG 202
LWRDE R T+ T+G ST++G
Sbjct: 285 LWRDENRRTRRKTLGAKARPTNSTHVG 311
>SB_53446| Best HMM Match : Neur_chan_memb (HMM E-Value=0.038)
Length = 406
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 282 LWRDEERVTQSTTIGCLMEQIYSTNLG 202
LWRDE R T+ T+G ST++G
Sbjct: 355 LWRDENRRTRRKTLGAKARPTNSTHVG 381
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.132 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,267,095
Number of Sequences: 59808
Number of extensions: 416612
Number of successful extensions: 604
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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