Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0906
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 129 9e-30
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 129 9e-30
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 128 3e-29
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 51 5e-06
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 51 5e-06
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 50 1e-05
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 50 1e-05
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 50 1e-05
AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein pr... 36 0.19
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 129 bits (312), Expect = 9e-30
Identities = 78/238 (32%), Positives = 117/238 (49%), Gaps = 6/238 (2%)
Frame = +1
Query: 4 RKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKY 183
R + +G +S + RE + YT+E + ++ +E L N+ + EFR WE+ D P+LK
Sbjct: 101 RGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKI 160
Query: 184 D--IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPSRCAV 357
D + PQ ++ LH AAYR L N L+ RI ++SE L F + T +R A+
Sbjct: 161 DKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARMAL 220
Query: 358 TVIGDSQERAALIV-QNLKLTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGS 534
+G S + Q L + + Y GGE+R++ G L H A + A AGS
Sbjct: 221 IGLGVSHPVLKQVAEQFLNMRGGLGLSGAKANYRGGEIREQNGDSLVHAAFVAESAVAGS 280
Query: 535 PQXXXXXXXXXXXGNGPVTKWGAD-NSPLAKAIGNI--GPFAAAGFNVSYSDNGLFGV 699
+ G GP K G++ S L +A+ PF + FN SYSD+GLFG+
Sbjct: 281 AEANAFSVLQHVLGAGPHVKRGSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGI 338
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 129 bits (312), Expect = 9e-30
Identities = 78/238 (32%), Positives = 117/238 (49%), Gaps = 6/238 (2%)
Frame = +1
Query: 4 RKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKY 183
R + +G +S + RE + YT+E + ++ +E L N+ + EFR WE+ D P+LK
Sbjct: 101 RGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKI 160
Query: 184 D--IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPSRCAV 357
D + PQ ++ LH AAYR L N L+ RI ++SE L F + T +R A+
Sbjct: 161 DKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARMAL 220
Query: 358 TVIGDSQERAALIV-QNLKLTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGS 534
+G S + Q L + + Y GGE+R++ G L H A + A AGS
Sbjct: 221 IGLGVSHPVLKQVAEQFLNMRGGLGLSGAKANYRGGEIREQNGDSLVHAAFVAESAVAGS 280
Query: 535 PQXXXXXXXXXXXGNGPVTKWGAD-NSPLAKAIGNI--GPFAAAGFNVSYSDNGLFGV 699
+ G GP K G++ S L +A+ PF + FN SYSD+GLFG+
Sbjct: 281 AEANAFSVLQHVLGAGPHVKRGSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGI 338
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 128 bits (308), Expect = 3e-29
Identities = 77/238 (32%), Positives = 117/238 (49%), Gaps = 6/238 (2%)
Frame = +1
Query: 4 RKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKY 183
R + +G +S + RE + YT+E + ++ +E L N+ + EFR WE+ D P+LK
Sbjct: 101 RGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKI 160
Query: 184 D--IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPSRCAV 357
D + PQ ++ LH AAY+ L N L+ RI ++SE L F + T +R A+
Sbjct: 161 DKAVAFQNPQTHVIENLHAAAYQNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARMAL 220
Query: 358 TVIGDSQERAALIV-QNLKLTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGS 534
+G S + Q L + + Y GGE+R++ G L H A + A AGS
Sbjct: 221 IGLGVSHPVLKQVAEQFLNMRGGLGLSGAKANYRGGEIREQNGDSLVHAAFVAESAVAGS 280
Query: 535 PQXXXXXXXXXXXGNGPVTKWGAD-NSPLAKAIGNI--GPFAAAGFNVSYSDNGLFGV 699
+ G GP K G++ S L +A+ PF + FN SYSD+GLFG+
Sbjct: 281 AEANAFSVLQHVLGAGPHVKRGSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGI 338
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 50.8 bits (116), Expect = 5e-06
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 14/247 (5%)
Frame = +1
Query: 7 KLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYD 186
++ +GA+++A RE Y +A L A+EIL +++ N E+ + +
Sbjct: 113 EIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILRE 172
Query: 187 IISLPPQIRAV--DLLHKAAYRR-GLGNSLFISPKRINDISSESLQLFASQNITPSRCAV 357
+ + ++ V D LH AY+ LG ++ + I IS + L + + + R +
Sbjct: 173 MQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVL 232
Query: 358 TVIGDSQERAALIVQNLKLTSS------DASQAEASTYYGGELR-KEIGGDLAHVALAVQ 516
G L + S + + G E+R ++ LAH+A+AV+
Sbjct: 233 AAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVE 292
Query: 517 GAPAGSPQXXXXXXXXXXXGNGPVTKWGADN--SPLAKAI--GNIGPFAAAGFNVSYSDN 684
P GN + G N S LA+ GN+ + FN SY+D
Sbjct: 293 AVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNL-CHSFQSFNTSYTDT 351
Query: 685 GLFGVVL 705
GL+G+ +
Sbjct: 352 GLWGLYM 358
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 50.8 bits (116), Expect = 5e-06
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 14/247 (5%)
Frame = +1
Query: 7 KLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYD 186
++ +GA+++A RE Y +A L A+EIL +++ N E+ + +
Sbjct: 122 EIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILRE 181
Query: 187 IISLPPQIRAV--DLLHKAAYRR-GLGNSLFISPKRINDISSESLQLFASQNITPSRCAV 357
+ + ++ V D LH AY+ LG ++ + I IS + L + + + R +
Sbjct: 182 MQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVL 241
Query: 358 TVIGDSQERAALIVQNLKLTSS------DASQAEASTYYGGELR-KEIGGDLAHVALAVQ 516
G L + S + + G E+R ++ LAH+A+AV+
Sbjct: 242 AAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVE 301
Query: 517 GAPAGSPQXXXXXXXXXXXGNGPVTKWGADN--SPLAKAI--GNIGPFAAAGFNVSYSDN 684
P GN + G N S LA+ GN+ + FN SY+D
Sbjct: 302 AVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNL-CHSFQSFNTSYTDT 360
Query: 685 GLFGVVL 705
GL+G+ +
Sbjct: 361 GLWGLYM 367
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 49.6 bits (113), Expect = 1e-05
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 14/246 (5%)
Frame = +1
Query: 1 QRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLK 180
++++ +GA+++A RE Y ++A L A+E+L ++V N ++ +
Sbjct: 110 EKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKERDVIL 169
Query: 181 YDIISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKRINDISSESLQLFASQNITPSRC 351
++ +R V + LH A++ L ++ + + +S L + S + R
Sbjct: 170 REMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRM 229
Query: 352 AVTVIGDSQERAALIVQNLKLTSSDASQAEAST-------YYGGELR-KEIGGDLAHVAL 507
+ G + + L + L + AE + + G E+R ++ AHVA+
Sbjct: 230 VLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLTPCRFTGSEIRHRDDALPFAHVAI 289
Query: 508 AVQGAPAGSPQXXXXXXXXXXXGNGPVTKWGAD--NSPLAK-AIGNIGPFAAAGFNVSYS 678
AV+G SP G+ T G +SPLA A+ N + F++ Y+
Sbjct: 290 AVEGPGWASPDSVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYA 349
Query: 679 DNGLFG 696
+ GL G
Sbjct: 350 ETGLLG 355
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 49.6 bits (113), Expect = 1e-05
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 14/246 (5%)
Frame = +1
Query: 1 QRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLK 180
++++ +GA+++A RE Y ++A L A+E+L ++V N ++ +
Sbjct: 110 EKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKERDVIL 169
Query: 181 YDIISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKRINDISSESLQLFASQNITPSRC 351
++ +R V + LH A++ L ++ + + +S L + S + R
Sbjct: 170 REMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRM 229
Query: 352 AVTVIGDSQERAALIVQNLKLTSSDASQAEAST-------YYGGELR-KEIGGDLAHVAL 507
+ G + + L + L + AE + + G E+R ++ AHVA+
Sbjct: 230 VLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLTPCRFTGSEIRHRDDALPFAHVAI 289
Query: 508 AVQGAPAGSPQXXXXXXXXXXXGNGPVTKWGAD--NSPLAK-AIGNIGPFAAAGFNVSYS 678
AV+G SP G+ T G +SPLA A+ N + F++ Y+
Sbjct: 290 AVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYA 349
Query: 679 DNGLFG 696
+ GL G
Sbjct: 350 ETGLLG 355
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 49.6 bits (113), Expect = 1e-05
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 14/246 (5%)
Frame = +1
Query: 1 QRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLK 180
++++ +GA+++A RE Y ++A L A+E+L ++V N ++ +
Sbjct: 110 EKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKERDVIL 169
Query: 181 YDIISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKRINDISSESLQLFASQNITPSRC 351
++ +R V + LH A++ L ++ + + +S L + S + R
Sbjct: 170 REMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRM 229
Query: 352 AVTVIGDSQERAALIVQNLKLTSSDASQAEAST-------YYGGELR-KEIGGDLAHVAL 507
+ G + + L + L + AE + + G E+R ++ AHVA+
Sbjct: 230 VLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLTPCRFTGSEIRHRDDALPFAHVAI 289
Query: 508 AVQGAPAGSPQXXXXXXXXXXXGNGPVTKWGAD--NSPLAK-AIGNIGPFAAAGFNVSYS 678
AV+G SP G+ T G +SPLA A+ N + F++ Y+
Sbjct: 290 AVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYA 349
Query: 679 DNGLFG 696
+ GL G
Sbjct: 350 ETGLLG 355
>AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein
protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.19
Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 12/174 (6%)
Frame = +1
Query: 220 DLLHKAAYRR-GLGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQERAALI 396
D LH AY+ LG ++ + I IS + L + + + R + G L
Sbjct: 22 DYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLD 81
Query: 397 VQNLKLTSS------DASQAEASTYYGGELR-KEIGGDLAHVALAVQGAPAGSPQXXXXX 555
+ S + + G E+R ++ LAH+A+AV+ P
Sbjct: 82 LAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLM 141
Query: 556 XXXXXXGNGPVTKWGADN--SPLAKAI--GNIGPFAAAGFNVSYSDNGLFGVVL 705
GN + G N S LA+ GN+ + FN SY+D GL+G+ +
Sbjct: 142 VANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLC-HSFQSFNTSYTDTGLWGLYM 194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.132 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,615,256
Number of Sequences: 237096
Number of extensions: 2107640
Number of successful extensions: 2712
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2704
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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