Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0906
         (720 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089228-1|AAL89966.1|  440|Drosophila melanogaster AT02348p pro...   138   9e-33
AE014296-2761|AAF49444.1|  440|Drosophila melanogaster CG4169-PA...   138   9e-33
AY058243-1|AAL13472.1|  470|Drosophila melanogaster GH01077p pro...    49   7e-06
AE014297-1916|AAN13622.1|  470|Drosophila melanogaster CG3731-PB...    49   7e-06
AE014297-1915|AAF55110.2|  470|Drosophila melanogaster CG3731-PA...    49   7e-06

>AY089228-1|AAL89966.1|  440|Drosophila melanogaster AT02348p
           protein.
          Length = 440

 Score =  138 bits (333), Expect = 9e-33
 Identities = 83/238 (34%), Positives = 123/238 (51%), Gaps = 3/238 (1%)
 Frame = +1

Query: 4   RKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKY 183
           R + Q+G  ++  GDRE + YT+  T D     L  L +L+    F+PWEL DNA  +  
Sbjct: 95  RNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLLQ-PAFKPWELVDNAKTVVN 153

Query: 184 DIISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPSRCAVTV 363
            + ++  + RA++L+HKAA+R GLGNS++    ++  +SSESL  + +Q     R AV  
Sbjct: 154 QLNAVSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQTFAAGRAAVVG 213

Query: 364 IGDSQERAALIVQNLKLTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGS-PQ 540
           +G      A   Q L+  S   S+A ++ +YGG+ RK+  G  A VA+A QGA A +  +
Sbjct: 214 VGIDNNTLAGFAQTLQFPSG-GSKAASANWYGGDARKDTSGHRAVVAVAGQGAAASNHKE 272

Query: 541 XXXXXXXXXXXGNGPVTKWGADNSPLAKAIGNIGPFAAA--GFNVSYSDNGLFGVVLS 708
                      G    TK G       +A+   G   A+    N SYSD GLFG V+S
Sbjct: 273 ALAFAILEQALGAKAATKRGTSAGLFGEAVNCAGGVGASVKAVNASYSDAGLFGFVVS 330


>AE014296-2761|AAF49444.1|  440|Drosophila melanogaster CG4169-PA
           protein.
          Length = 440

 Score =  138 bits (333), Expect = 9e-33
 Identities = 83/238 (34%), Positives = 123/238 (51%), Gaps = 3/238 (1%)
 Frame = +1

Query: 4   RKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKY 183
           R + Q+G  ++  GDRE + YT+  T D     L  L +L+    F+PWEL DNA  +  
Sbjct: 95  RNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLLQ-PAFKPWELVDNAKTVVN 153

Query: 184 DIISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPSRCAVTV 363
            + ++  + RA++L+HKAA+R GLGNS++    ++  +SSESL  + +Q     R AV  
Sbjct: 154 QLNAVSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQTFAAGRAAVVG 213

Query: 364 IGDSQERAALIVQNLKLTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGS-PQ 540
           +G      A   Q L+  S   S+A ++ +YGG+ RK+  G  A VA+A QGA A +  +
Sbjct: 214 VGIDNNTLAGFAQTLQFPSG-GSKAASANWYGGDARKDTSGHRAVVAVAGQGAAASNHKE 272

Query: 541 XXXXXXXXXXXGNGPVTKWGADNSPLAKAIGNIGPFAAA--GFNVSYSDNGLFGVVLS 708
                      G    TK G       +A+   G   A+    N SYSD GLFG V+S
Sbjct: 273 ALAFAILEQALGAKAATKRGTSAGLFGEAVNCAGGVGASVKAVNASYSDAGLFGFVVS 330


>AY058243-1|AAL13472.1|  470|Drosophila melanogaster GH01077p
           protein.
          Length = 470

 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 11/242 (4%)
 Frame = +1

Query: 7   KLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYD 186
           ++  +GA+++A   RE   +  +     +  A+EIL +++ N +    E+      +  +
Sbjct: 105 EVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGEAEIARERSVILRE 164

Query: 187 IISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKRINDISSESLQLFASQNITPSRCAV 357
           +  +   ++ V  D LH  AY+   LG ++    K I  I    L  +   +   SR  +
Sbjct: 165 MQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQTHYKASRIVL 224

Query: 358 TVIGDSQERAALIVQNLKLTSSDASQAEAST----YYGGELR-KEIGGDLAHVALAVQGA 522
              G  +    + +    L   +AS   A      + G E+R ++    LAHVA+AV+G 
Sbjct: 225 AAAGGVKHDDLVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGC 284

Query: 523 PAGSPQXXXXXXXXXXXGNGPVTKWGADN--SPLAKAIGNIG-PFAAAGFNVSYSDNGLF 693
                            G    ++ G  N  S LA+A        +   FN  Y D GL+
Sbjct: 285 GWTDQDNIPLMVANTLVGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLW 344

Query: 694 GV 699
           G+
Sbjct: 345 GI 346


>AE014297-1916|AAN13622.1|  470|Drosophila melanogaster CG3731-PB,
           isoform B protein.
          Length = 470

 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 11/242 (4%)
 Frame = +1

Query: 7   KLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYD 186
           ++  +GA+++A   RE   +  +     +  A+EIL +++ N +    E+      +  +
Sbjct: 105 EVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGEAEIARERSVILRE 164

Query: 187 IISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKRINDISSESLQLFASQNITPSRCAV 357
           +  +   ++ V  D LH  AY+   LG ++    K I  I    L  +   +   SR  +
Sbjct: 165 MQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQTHYKASRIVL 224

Query: 358 TVIGDSQERAALIVQNLKLTSSDASQAEAST----YYGGELR-KEIGGDLAHVALAVQGA 522
              G  +    + +    L   +AS   A      + G E+R ++    LAHVA+AV+G 
Sbjct: 225 AAAGGVKHDDLVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGC 284

Query: 523 PAGSPQXXXXXXXXXXXGNGPVTKWGADN--SPLAKAIGNIG-PFAAAGFNVSYSDNGLF 693
                            G    ++ G  N  S LA+A        +   FN  Y D GL+
Sbjct: 285 GWTDQDNIPLMVANTLVGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLW 344

Query: 694 GV 699
           G+
Sbjct: 345 GI 346


>AE014297-1915|AAF55110.2|  470|Drosophila melanogaster CG3731-PA,
           isoform A protein.
          Length = 470

 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 11/242 (4%)
 Frame = +1

Query: 7   KLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYD 186
           ++  +GA+++A   RE   +  +     +  A+EIL +++ N +    E+      +  +
Sbjct: 105 EVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGEAEIARERSVILRE 164

Query: 187 IISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKRINDISSESLQLFASQNITPSRCAV 357
           +  +   ++ V  D LH  AY+   LG ++    K I  I    L  +   +   SR  +
Sbjct: 165 MQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQTHYKASRIVL 224

Query: 358 TVIGDSQERAALIVQNLKLTSSDASQAEAST----YYGGELR-KEIGGDLAHVALAVQGA 522
              G  +    + +    L   +AS   A      + G E+R ++    LAHVA+AV+G 
Sbjct: 225 AAAGGVKHDDLVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGC 284

Query: 523 PAGSPQXXXXXXXXXXXGNGPVTKWGADN--SPLAKAIGNIG-PFAAAGFNVSYSDNGLF 693
                            G    ++ G  N  S LA+A        +   FN  Y D GL+
Sbjct: 285 GWTDQDNIPLMVANTLVGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLW 344

Query: 694 GV 699
           G+
Sbjct: 345 GI 346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.314    0.132    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,693,580
Number of Sequences: 53049
Number of extensions: 672718
Number of successful extensions: 996
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)