Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0906
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   1.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.8  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 236 QPIVVDWVTRSSSRQR 283
           QPI   W+TRS +R++
Sbjct: 81  QPISYKWITRSGTREQ 96


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 187 IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRIND--ISSESLQLFAS 327
           +I L  Q+   + +H ++  R L +S+F   +R+N   +S   L LF S
Sbjct: 294 MICLNGQVLKRESIHNSSNARFLMDSMFDFAERVNSLRLSDAELGLFCS 342


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 640 GPFAAAGFNVSYSDNGLFGVVLS 708
           G +   G N  + + G+FG+ LS
Sbjct: 242 GDYNIGGLNFQWGEEGIFGMSLS 264


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 623 RPSATSAHSQRPDSTLATATMDYSALFY 706
           RP + S   Q  +S   T+T+  S +FY
Sbjct: 553 RPGSNSIERQSSESPFTTSTIMPSDIFY 580


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 623 RPSATSAHSQRPDSTLATATMDYSALFY 706
           RP + S   Q  +S   T+T+  S +FY
Sbjct: 553 RPGSNSIERQSSESPFTTSTIMPSDIFY 580


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.132    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,315
Number of Sequences: 438
Number of extensions: 3728
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)