BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0905
(508 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 0.60
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.0
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 22 3.2
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 22 4.2
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 5.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.6
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 21 7.3
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 21 7.3
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 24.6 bits (51), Expect = 0.60
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 133 PSSWHALPPPEYVGQHAPTEVEARRDSPP 219
PS+ LPP + QH P++ R S P
Sbjct: 306 PSTAGFLPPSYHPHQHHPSQYHPHRGSSP 334
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 1.0
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 76 EPALAHLGSTGFPLPVAQPPSSWHALPPPEY-VGQHAPTEVEA 201
EP + STG +P ++ + PPP + V Q +P + A
Sbjct: 354 EPPKSSESSTGSSIPKLNLSTALMSQPPPNFGVSQVSPVSMSA 396
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 22.2 bits (45), Expect = 3.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 194 WKHGGILHLEWYPP 235
W H GI++ E PP
Sbjct: 73 WDHKGIVYFELLPP 86
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 102 PVYISQPRPPHPRLRREAEPEAEP 125
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 158 PVYISQPRPPHPRLRREAEPEAEP 181
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 46 PVYIPQPRPPHPRLRREAEPEAEP 69
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 186 PVYIPQPRPPHPRLRREAEPEAEP 209
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 214 PVYIPQPRPPHPRLRREAEPEAEP 237
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 242 PVYIPQPRPPHPRLRREAKPEAKP 265
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 408 EDANLYKKCPNPKPVTCPVMG 346
+DA+ CP + TCP+ G
Sbjct: 59 KDADGRVSCPVLRAYTCPICG 79
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 200 ASTSVGACCPTYSGGGKAC 144
+S S+ C Y G GK C
Sbjct: 75 SSRSIDPCASKYCGIGKEC 93
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 47 PVYIPQPRPPHPRLRREAEPEAEP 70
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 75 PVYIPQPRPPHPRLRREAEPEAEP 98
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 103 PVYIPQPRPPHPRLRREAEPEAEP 126
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 18 PVYIPQPRPPHPRLRREAEPEAEP 41
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 46 PVYIPQPRPPHPRLRREAEPEAEP 69
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 74 PVYIPQPRPPHPRLRREAEPEAEP 97
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 102 PVYIPQPRPPHPRLRREAEPEAEP 125
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 130 PVYIPQPRPPHPRLRREAKPEAEP 153
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
P Y+ Q P RR++ P P
Sbjct: 158 PVYIPQPRPPHPRLRREAEPEAEP 181
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,407
Number of Sequences: 438
Number of extensions: 4327
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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