SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0905
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.60 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.0  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   3.2  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   4.2  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              21   5.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   5.6  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   7.3  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   7.3  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 133 PSSWHALPPPEYVGQHAPTEVEARRDSPP 219
           PS+   LPP  +  QH P++    R S P
Sbjct: 306 PSTAGFLPPSYHPHQHHPSQYHPHRGSSP 334


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 76  EPALAHLGSTGFPLPVAQPPSSWHALPPPEY-VGQHAPTEVEA 201
           EP  +   STG  +P     ++  + PPP + V Q +P  + A
Sbjct: 354 EPPKSSESSTGSSIPKLNLSTALMSQPPPNFGVSQVSPVSMSA 396


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 194 WKHGGILHLEWYPP 235
           W H GI++ E  PP
Sbjct: 73  WDHKGIVYFELLPP 86


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 102 PVYISQPRPPHPRLRREAEPEAEP 125



 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 158 PVYISQPRPPHPRLRREAEPEAEP 181



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 46  PVYIPQPRPPHPRLRREAEPEAEP 69



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 186 PVYIPQPRPPHPRLRREAEPEAEP 209



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 214 PVYIPQPRPPHPRLRREAEPEAEP 237



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 242 PVYIPQPRPPHPRLRREAKPEAKP 265


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 408 EDANLYKKCPNPKPVTCPVMG 346
           +DA+    CP  +  TCP+ G
Sbjct: 59  KDADGRVSCPVLRAYTCPICG 79


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 200 ASTSVGACCPTYSGGGKAC 144
           +S S+  C   Y G GK C
Sbjct: 75  SSRSIDPCASKYCGIGKEC 93


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 47  PVYIPQPRPPHPRLRREAEPEAEP 70



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 75  PVYIPQPRPPHPRLRREAEPEAEP 98



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 103 PVYIPQPRPPHPRLRREAEPEAEP 126


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 18  PVYIPQPRPPHPRLRREAEPEAEP 41



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 46  PVYIPQPRPPHPRLRREAEPEAEP 69



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 74  PVYIPQPRPPHPRLRREAEPEAEP 97



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 102 PVYIPQPRPPHPRLRREAEPEAEP 125



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 130 PVYIPQPRPPHPRLRREAKPEAEP 153



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 160 PEYVGQHAPTEVEARRDSPPRVVP 231
           P Y+ Q  P     RR++ P   P
Sbjct: 158 PVYIPQPRPPHPRLRREAEPEAEP 181


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,407
Number of Sequences: 438
Number of extensions: 4327
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -