Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0905
(508 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 37 0.007
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 30 1.0
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 1.4
At5g35732.1 68418.m04275 expressed protein 29 1.8
At5g09560.1 68418.m01107 KH domain-containing protein various pr... 29 1.8
At4g34440.1 68417.m04894 protein kinase family protein contains ... 29 1.8
At3g13490.1 68416.m01697 tRNA synthetase class II (D, K and N) f... 29 1.8
At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) / ... 29 2.4
At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gen... 29 2.4
At2g24570.1 68415.m02934 WRKY family transcription factor identi... 29 2.4
At1g24490.1 68414.m03084 60 kDa inner membrane family protein si... 29 2.4
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 3.1
At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identic... 28 3.1
At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identic... 28 3.1
At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein ... 28 4.2
At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein ... 28 4.2
At1g60060.1 68414.m06766 expressed protein 28 4.2
At3g22830.1 68416.m02877 heat shock transcription factor family ... 27 5.5
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 5.5
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 5.5
At1g02580.1 68414.m00209 maternal embryogenesis control protein ... 27 5.5
At5g47510.1 68418.m05866 SEC14 cytosolic factor family protein /... 27 7.3
At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein ... 27 7.3
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 27 7.3
At3g23660.1 68416.m02975 transport protein, putative similar to ... 27 7.3
At3g19360.1 68416.m02456 zinc finger (CCCH-type) family protein ... 27 7.3
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 27 7.3
At1g26150.1 68414.m03192 protein kinase family protein similar t... 27 7.3
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 27 9.6
At5g05670.2 68418.m00624 expressed protein 27 9.6
At5g05670.1 68418.m00623 expressed protein 27 9.6
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 27 9.6
At4g23882.1 68417.m03434 heavy-metal-associated domain-containin... 27 9.6
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 27 9.6
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 27 9.6
At3g59550.1 68416.m06646 cohesion family protein SYN3 (SYN3) nea... 27 9.6
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 27 9.6
At3g29390.1 68416.m03693 hydroxyproline-rich glycoprotein family... 27 9.6
At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein ... 27 9.6
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 46 SQSLTSAERVEPALAHLGSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRV 225
S +++ P + + S P PVAQP ++ PPPE P AR DS P V
Sbjct: 587 SPPVSTTPSAVPEASTIPSPPAPAPVAQPTHVFNQTPPPE----QTPKSGAARTDSEPEV 642
Query: 226 VPSWGNVFCKFA-IIHFVPLLFNQ 294
W C + +++ P+++ +
Sbjct: 643 SSFW--TTCPYCYVLYEYPIIYEE 664
Score = 30.3 bits (65), Expect = 0.78
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 37 PAASQSLTSAE---RVEPALAHLGSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARR 207
PAAS+S ++ +P ++ +T P+PV+QPP++ LP V Q PT
Sbjct: 507 PAASKSFPISQPPTTSKPFVSQPPNTSKPMPVSQPPTTSKPLP----VSQPPPTFQSTCP 562
Query: 208 DSPP 219
PP
Sbjct: 563 SQPP 566
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 37 PAASQSLTSAERVEPALAHLGSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSP 216
PA + + A +V P ++ +T P P PP+S + PP APT SP
Sbjct: 75 PAVTPTSPPAPKVAPVISP--ATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPASP 132
Query: 217 P 219
P
Sbjct: 133 P 133
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 70 RVEPALAHLGSTGFPLPVAQPPSSWHALPPPEYVGQHAP 186
RV P + S P P+ PP H+ PPP Y P
Sbjct: 532 RVPPPQPPMPSPSPPSPIYSPPPPVHSPPPPVYSSPPPP 570
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 112 PLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRVVPS 234
P PV PP ++ PPP +V P SPP V S
Sbjct: 553 PPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHS 593
>At5g35732.1 68418.m04275 expressed protein
Length = 100
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 96 RFDGFSAARRTAPF-IVACFAPPRIRG 173
R DGF++ PF I++CFA PR+ G
Sbjct: 43 RRDGFNSVIMRFPFSIISCFAVPRVSG 69
>At5g09560.1 68418.m01107 KH domain-containing protein various
predicted RNA binding proteins, Arabidopsis thaliana
Length = 563
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 112 PLPVAQPPSSWHALPPPEYV 171
PLP+ QPPS+ PPPEYV
Sbjct: 15 PLPLPQPPSA----PPPEYV 30
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 112 PLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRVVPS 234
P P + PP S + PPP+ +P +++ P PS
Sbjct: 33 PTPPSSPPPSSISAPPPDISASFSPPPAPPTQETSPPTSPS 73
>At3g13490.1 68416.m01697 tRNA synthetase class II (D, K and N)
family protein similar to SP|Q9RHV9 Lysyl-tRNA
synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) {Bacillus
stearothermophilus}; contains Pfam profile: PF00152 tRNA
synthetases class II (D, K and N)
Length = 602
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 95 RCASAGSTRSALVSDCEAAGPKGKVRRKRKS 3
RCASA S+ S+ + E + P G+ RR S
Sbjct: 44 RCASAASSSSSSATTAETSKPSGRNRRSASS 74
>At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) /
caspase family protein contains similarity to
latex-abundant protein [Hevea brasiliensis] gb:AAD13216;
contains Pfam profile PF00656: ICE-like protease
(caspase) p20 domain
Length = 418
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 76 EPAL-AHLGSTGFPLPVAQP-PSSWHALPPPEYVGQHAPTEVEARRDSPPRVVP 231
EP L +H ++ FP P + P PS++ PP HAP +PP P
Sbjct: 37 EPRLQSHASASPFPFPNSSPAPSTFIYPPPTPSPYTHAPHAPSPFNHAPPDSYP 90
>At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gene
for histone protein GB:X15142 GI:3204 [Physarum
polycephalum]
Length = 614
Score = 28.7 bits (61), Expect = 2.4
Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -3
Query: 230 GTTLGG--ESLRASTSVGACCPTYSGGGKACHDEGGCATGSGKPVEPRCASAGSTRSALV 57
G T GG E+ S S GA S G A GG A G+ AS GST S
Sbjct: 400 GATSGGSAETSDESASGGAASGGESASGGAA--SGGSAETGGESTSSGVASGGSTGSESA 457
Query: 56 SDCEAAG 36
S A+G
Sbjct: 458 SAGAASG 464
>At2g24570.1 68415.m02934 WRKY family transcription factor identical
to WRKY transcription factor 17 GI:15991743 from
[Arabidopsis thaliana]
Length = 321
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 118 PVAQPPSSWHALPPPEYVGQHAPTEVEA 201
PV PPSS ++PPP V APT++ A
Sbjct: 76 PVHSPPSS--SVPPPVKVTTPAPTQISA 101
>At1g24490.1 68414.m03084 60 kDa inner membrane family protein
similar to chloroplast membrane protein (ALBINO3)
(GI:3927828) [Arabidopsis thaliana]
Length = 1013
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 218 GGESLRASTSVGACCPTYSGGGKACHDEGGCATGSGKPVEPRCAS 84
GG ST G+ P +GGG +GG SGK E + +S
Sbjct: 410 GGSGSPPSTGGGSGSPPSTGGGGGSPSKGGGGGKSGKSGEEKSSS 454
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 3.1
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 94 LGSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEV-EARRDSPPRVVPSWGNVFCKFAIIH 270
LG T F P A LP Y+ E+ +A + V W NVF K+A H
Sbjct: 93 LGYTDFSTPDALVTLFGSTLPTTVYLELPNGEELAQALYSKGVQYVIYWKNVFSKYAACH 152
Query: 271 FVPLLFN 291
F LF+
Sbjct: 153 FRHSLFS 159
>At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identical
to gi_11935086_gb_AAG41963
Length = 162
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 79 PALA--HLGSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRVVPS 234
PA A H ST P P+ A P PE A T VEA ++PP P+
Sbjct: 24 PATAPIHSPSTSPHKPKPTSPAISPAAPTPESTEAPAKTPVEAPVEAPPSPTPA 77
>At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identical
to gi_11935086_gb_AAG41963
Length = 185
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 79 PALA--HLGSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRVVPS 234
PA A H ST P P+ A P PE A T VEA ++PP P+
Sbjct: 24 PATAPIHSPSTSPHKPKPTSPAISPAAPTPESTEAPAKTPVEAPVEAPPSPTPA 77
>At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 407
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 236 GVMFFVSLPSFISFLCYLTRGRSPGTALTTGHPP 337
GV+F V F+ L +LT R PG HPP
Sbjct: 69 GVLFTV----FVLILLFLTSARDPGIVPRNSHPP 98
>At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 410
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 278 LCYLTRGRSPGTALTTGHPPATHPITGHVTGLG 376
L LT GR PG HPP + G+ TG G
Sbjct: 93 LLMLTSGRDPGIIPRNSHPPEPEVVDGN-TGSG 124
>At1g60060.1 68414.m06766 expressed protein
Length = 386
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +1
Query: 85 LAHLGSTGFPLPVAQPPSSWH--ALPPPEYVGQH 180
L H S+G+P A P +WH + PP +H
Sbjct: 219 LPHPSSSGYPFINASPSDTWHFPGVAPPHQQPEH 252
>At3g22830.1 68416.m02877 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 406
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -1
Query: 202 VLPLRWEHAAPRILGGAKHATMKGAVRRAAENPSNR 95
V P RWE A L G KH +K RR N SN+
Sbjct: 125 VNPDRWEFANEGFLRGQKH-LLKNIRRRKTSNNSNQ 159
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +1
Query: 112 PLPVAQPPSSWHALPPPEYVGQ---HAPTEVEARRDSPP 219
P PV PP H+ PPP Y H+P PP
Sbjct: 657 PPPVFSPPPPMHSPPPPVYSPPPPVHSPPPPPVHSPPPP 695
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.5 bits (58), Expect = 5.5
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +1
Query: 37 PAASQSLTSAERVEPALAHLGSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSP 216
P S S +S P+ + L S P PPSS + PP + +P + SP
Sbjct: 59 PPLSLSPSSPPPPPPSSSPLSSLS-PSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSP 117
Query: 217 PRVVPS 234
P PS
Sbjct: 118 PPPPPS 123
>At1g02580.1 68414.m00209 maternal embryogenesis control protein /
MEDEA (MEA) nearly identical to MEDEA GB:AAC39446
GI:3089625 from [Arabidopsis thaliana]; contains Pfam
profile PF00856: SET domain
Length = 689
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -3
Query: 179 CCPTYSGGGKACHDE-GGCATGSGKPVEPRCASAGSTR 69
CC Y G K C++ GGC G+ +C + R
Sbjct: 468 CCEKYCGCSKDCNNRFGGCNCAIGQCTNRQCPCFAANR 505
>At5g47510.1 68418.m05866 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus], SEC14 cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis]
and to SEC14 cytosolic factor (SP:P53989) [Candida
glabrata]
Length = 376
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 173 PTYSGGGKACHDEGGC 126
PT+ GG C D GGC
Sbjct: 255 PTFLGGNCTCSDHGGC 270
>At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 718
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +1
Query: 88 AHLGSTGFPLPVAQPP--SSWHALPPP 162
+H+G+T P PV PP SS PPP
Sbjct: 618 SHMGNTQNPRPVGHPPQDSSSGRAPPP 644
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites at
intron 18
Length = 1606
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +1
Query: 40 AASQSLTSAERVEPALAHLGSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPP 219
A + + +SA A T P PV+QP A P PE Q+ VE + PP
Sbjct: 1206 ATTTAPSSASAPVDPFAMSSWTQQPQPVSQPAPPGVAAPIPEDFFQNTIPSVEVAKTLPP 1265
>At3g23660.1 68416.m02975 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 765
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -2
Query: 123 DGQRKTRRTEVCQRWLDALCARQRLRGGWPE 31
+GQ R T VC++W+D+ + + L G+ +
Sbjct: 492 EGQTLLRVTTVCRQWIDSAVSSEELVQGFDQ 522
>At3g19360.1 68416.m02456 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 386
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 127 QPPSSWHALPPPEYVGQHAPTEVEARRD-SPPRVVPSWGN 243
QPPS+W + P GQ E E R+ P + P N
Sbjct: 135 QPPSNWQEIVGPPPAGQDRERERERERERERPSLAPVVNN 174
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 27.1 bits (57), Expect = 7.3
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = +1
Query: 34 GPAASQSLTSAERVEPALAHLGSTGFPLPVAQPP-SSWHALPPPEYVGQHAPTEVEARRD 210
GP + P +T P P PP +S HALPP T
Sbjct: 156 GPKKPKKHHPGPATSPPAPSAPATSPPAPPNAPPRNSSHALPPKS-------TAAGGPLT 208
Query: 211 SPPRVVPSWGN 243
SP R VPS GN
Sbjct: 209 SPSRGVPSSGN 219
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 109 FPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRVVP 231
FP P+ PP PPP V + P + +SPP P
Sbjct: 103 FPPPIDSPPPESTNSPPPPEVFEPPPPPAD-EDESPPAPPP 142
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Frame = +1
Query: 115 LPVAQPPSSWHALPPPEYVG------QHAPTEVEARRDSPPRVVPS 234
LP PPS+ LPPP+ V +H P+ + PPR +PS
Sbjct: 157 LPAPDPPSN--PLPPPKLVPPSHSPPRHLPSPPASEIPPPPRHLPS 200
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 26.6 bits (56), Expect = 9.6
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 112 PLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRVVPSWGNVF 249
P PV PP S PPP HA +R SPP +G V+
Sbjct: 39 PPPVYSPPISPPPPPPPPPPQSHA---AAYKRYSPPPPPSKYGRVY 81
>At5g05670.2 68418.m00624 expressed protein
Length = 260
Score = 26.6 bits (56), Expect = 9.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +2
Query: 179 MLPPKWKHGGILHLEWYPP-------GVMFFVSLPSFISFLCYLTRGRSPGTALTTG 328
+L +W H GI +L+ PP GV+ F ++ F+S L R T L +G
Sbjct: 9 ILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSI--RLVRRTKSNTVLLSG 63
>At5g05670.1 68418.m00623 expressed protein
Length = 260
Score = 26.6 bits (56), Expect = 9.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +2
Query: 179 MLPPKWKHGGILHLEWYPP-------GVMFFVSLPSFISFLCYLTRGRSPGTALTTG 328
+L +W H GI +L+ PP GV+ F ++ F+S L R T L +G
Sbjct: 9 ILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSI--RLVRRTKSNTVLLSG 63
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 112 PLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRVVPS 234
P PV PP H+ PPP V P P VV S
Sbjct: 599 PAPVHSPPPPVHSPPPPPPVYSPPPPVFSPPPSQSPPVVYS 639
>At4g23882.1 68417.m03434 heavy-metal-associated domain-containing
protein
Length = 284
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +1
Query: 106 GFPLPVAQPPSSWH-ALPPPEYVGQHAPTEVEARRDSPP 219
GF P+ PP S+ PPP Y G A A SPP
Sbjct: 234 GFTTPIPYPPPSFFPGRPPPPYTG--AGMFQSAPPQSPP 270
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 130 PPSSWHALPPPEYVGQHAPTEVEARRDSPP 219
PP ++ PPP V H+P SPP
Sbjct: 664 PPPVHYSSPPPPEVHYHSPPPSPVHYSSPP 693
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 381 PNPKPVTCPVMG*VAGGCPV 322
PNP+PVT P +G CP+
Sbjct: 68 PNPRPVTPPRTPGSSGNCPI 87
>At3g59550.1 68416.m06646 cohesion family protein SYN3 (SYN3) nearly
identical to cohesion family protein SYN3 [Arabidopsis
thaliana] GI:12006362; supporting cDNA
gi|12006361|gb|AF281155.1|AF281155
Length = 693
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +1
Query: 46 SQSLTSAERVEPALAHLGSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSP 216
+QS + + + + HL GFP+ + PP ++ Q E E+ R P
Sbjct: 503 AQSPRTFDNDDMGIEHLRDGGFPVYMPSPPPRSSPFRTDDFTTQSGNWETESYRTEP 559
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 118 PVAQPPSSWHALPPPEYVGQHAPTEVEARRDS 213
P PP + PPP + GQ P + ++DS
Sbjct: 554 PQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDS 585
>At3g29390.1 68416.m03693 hydroxyproline-rich glycoprotein family
protein sequencing discrepancy between cDNA and genomic
sequence prevents representation of entire coding
sequence
Length = 578
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 112 PLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPR 222
P PPSS LPPP +P ++ PPR
Sbjct: 491 PSKTMSPPSSKSMLPPPPRSKTMSPLSSKSMLPPPPR 527
>At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 443
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 278 LCYLTRGRSPGTALTTGHPPATHPITGHV 364
L LT GR PG HPP + G++
Sbjct: 93 LLLLTSGRDPGIIPRNAHPPEPETLDGNM 121
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,236,749
Number of Sequences: 28952
Number of extensions: 324196
Number of successful extensions: 1390
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -