Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0902
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.59 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.4  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    23   2.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.4  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   9.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.6  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   9.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   9.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   LRTGGWYVENGALQIHNSANTAKYRIIPEG 98
           +R   W   +G+L  H +   +KY ++P G
Sbjct: 154 VRVEAWVGSDGSLYNHTANYDSKYLVLPSG 183


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = -3

Query: 481  PYSIHSRYSTHPSQHSHICCMQSPKKRIFFIA*LGGRAHNPPGV-KWLLEPID 326
            P S+HS     P QHS    +  PK     +      A    GV K+L   ID
Sbjct: 1796 PPSVHSSTVVPPPQHSTTQSLVDPKSEFKVVCYFTNWAWYRQGVGKYLPSDID 1848


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 517 HFQTSSNILL--LIPYSIHSRYSTHPSQHSHI 428
           H   S NI+   + PY    ++  HPSQ +H+
Sbjct: 279 HKMASMNIVPYHMSPYGHPYQFDLHPSQFAHL 310


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 517 HFQTSSNILL--LIPYSIHSRYSTHPSQHSHI 428
           H   S NI+   + PY    ++  HPSQ +H+
Sbjct: 279 HKMASMNIVPYHMSPYGHPYQFDLHPSQFAHL 310


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 517 HFQTSSNILL--LIPYSIHSRYSTHPSQHSHI 428
           H   S NI+   + PY    ++  HPSQ +H+
Sbjct: 279 HKMASMNIVPYHMSPYGHPYQFDLHPSQFAHL 310


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 517 HFQTSSNILL--LIPYSIHSRYSTHPSQHSHI 428
           H   S NI+   + PY    ++  HPSQ +H+
Sbjct: 235 HKMASMNIVPYHMSPYGHPYQFDLHPSQFAHL 266


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 517 HFQTSSNILL--LIPYSIHSRYSTHPSQHSHI 428
           H   S NI+   + PY    ++  HPSQ +H+
Sbjct: 279 HKMASMNIVPYHMSPYGHPYQFDLHPSQFAHL 310


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 517 HFQTSSNILL--LIPYSIHSRYSTHPSQHSHI 428
           H   S NI+   + PY    ++  HPSQ +H+
Sbjct: 67  HKMASMNIVPYHMSPYGHPYQFDLHPSQFAHL 98


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 517 HFQTSSNILL--LIPYSIHSRYSTHPSQHSHI 428
           H   S NI+   + PY    ++  HPSQ +H+
Sbjct: 279 HKMASMNIVPYHMSPYGHPYQFDLHPSQFAHL 310


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 629 YRGSGRLKKKWMDCMKDDICK 691
           Y   G  KK++ +  KD++ K
Sbjct: 110 YDPDGTYKKRYFESQKDEVSK 130


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 566 HVMRRNENEVGKRVLTMNVEGYRGSGRLKKKWM 664
           H ++ ++  + + V   NV    G G+L  +WM
Sbjct: 629 HTVKVSDFGLSRDVYQDNVYCKNGGGKLPVRWM 661


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 346 WLLEPIDIYNVNAPPTLRYK 287
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 170 PLVSPHG*VPPP 205
           P V PH  VPPP
Sbjct: 12  PTVLPHQEVPPP 23


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 281 LKLISQSGWRIYVVDVYGLQ*PLNTRWVVSSSTQLSNKKNPLFRRL 418
           L+++  S   +Y +D    +     +W+ +S  ++S   N LFR L
Sbjct: 274 LQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFL 319


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 611 LTLSYQPHFHFVSSHVHT 558
           L  SYQ HF+  + + HT
Sbjct: 37  LRTSYQHHFNSPAGNAHT 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,298
Number of Sequences: 336
Number of extensions: 4403
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)