Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0902
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   4.0  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   4.0  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   4.0  
AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione S-tran...    24   5.2  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   5.2  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   9.1  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   9.1  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 469 HSRYSTHPSQHSHICCMQSPKKRI 398
           H RY  + + H   CC+ + ++R+
Sbjct: 56  HKRYCKYRTCHCEKCCLTAERQRV 79


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 469 HSRYSTHPSQHSHICCMQSPKKRI 398
           H RY  + + H   CC+ + ++R+
Sbjct: 56  HKRYCKYRTCHCEKCCLTAERQRV 79


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 124 VASSRLVVWPSGIIRYLAVLALLWI 50
           +A   L+ WP+ +I + AVL+L  I
Sbjct: 622 IAVMFLISWPTALITFAAVLSLYLI 646


>AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione
           S-transferase E6 protein.
          Length = 227

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 539 RSARLGWYGHVMRRNENEVGKRVLTMNVEGYRGSG 643
           R ++L +YG VM R     G+ + T+  +   G G
Sbjct: 190 RLSKLPYYGEVMGRGLKAAGELMQTLGSKNSGGGG 224


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +3

Query: 42  ALQIHNSANTAKYRIIPEGHTTRRLEATYFRTLNA 146
           AL + N+ NTA ++ I     T+R+ A   R +++
Sbjct: 568 ALDVRNAFNTASWQAIATALRTKRVPAGLQRIIHS 602


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +2

Query: 533 KLRSARLGWYGHVMRRNENEVGKRVLTMNVEGY--RGSGRLKKKWMDCMKDDIC 688
           KLR   L W   V       +G  +LTM V  Y  R   R +   +  +K+ +C
Sbjct: 568 KLREEHLFWRAFVYITKPAIIGGVLLTMGVATYYLRAKSRAQIAKVKLLKELLC 621


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 517 HFQTSSNILL--LIPYSIHSRYSTHPSQHSHI 428
           H   S NI+   + PY    ++  HPSQ +H+
Sbjct: 339 HKMASMNIVPYHMSPYGHPYQFDIHPSQFAHL 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,221
Number of Sequences: 2352
Number of extensions: 17720
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)