Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0902
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 31 0.59
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 31 0.59
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 31 0.59
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 31 0.59
AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81462-3|CAB03842.2| 1034|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z72505-2|CAA96609.1| 340|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z82086-4|CAB04998.1| 329|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF016415-7|AAW88412.1| 296|Caenorhabditis elegans Serpentine re... 28 5.5
Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 28 7.3
Z72505-1|CAA96608.1| 338|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical pr... 27 9.6
AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion transpo... 27 9.6
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 536 LRSARLGWYGHVMRRNENEVGKRVLTMNVEGY-RGSGRLKKKWMDCMKDDI 685
++ +LGW GHV RR + + G+ R GR +W D ++ +I
Sbjct: 807 VKKRKLGWAGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRWTDSLRKEI 857
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 536 LRSARLGWYGHVMRRNENEVGKRVLTMNVEGY-RGSGRLKKKWMDCMKDDI 685
++ +LGW GHV RR + + G+ R GR +W D ++ +I
Sbjct: 982 VKKRKLGWAGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRWTDSLRKEI 1032
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 536 LRSARLGWYGHVMRRNENEVGKRVLTMNVEGY-RGSGRLKKKWMDCMKDDI 685
++ +LGW GHV RR + + G+ R GR +W D ++ +I
Sbjct: 721 VKKRKLGWAGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRWTDSLRKEI 771
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 536 LRSARLGWYGHVMRRNENEVGKRVLTMNVEGY-RGSGRLKKKWMDCMKDDI 685
++ +LGW GHV RR + + G+ R GR +W D ++ +I
Sbjct: 333 VKKRKLGWAGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRWTDSLRKEI 383
>AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical
protein Y51F10.8 protein.
Length = 204
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 497 VRGSLKVAPVTEKLRSARLGWYGHVMRRNENEVGKRVLTMN----VEGYRGSGRLKKKWM 664
VR K+ ++ +LGW GHV RR + G+ MN + R GR +W
Sbjct: 105 VREKSKLRDPLIHIKKRKLGWAGHVARRTD---GRWTTLMNDWCPRDEKRPVGRPPMRWN 161
Query: 665 DCMKDDI 685
D ++ ++
Sbjct: 162 DSLRKEV 168
>Z81462-3|CAB03842.2| 1034|Caenorhabditis elegans Hypothetical protein
C04H5.3 protein.
Length = 1034
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +2
Query: 197 PPPCLFRP*SSYAFRFE--GRGSRCNHTETLKLISQSGWRIYVVDVYGL-----Q*PLNT 355
P CLF + A E G G R TET K++ ++ + +++++ G+ Q T
Sbjct: 955 PRYCLFGETVNIAAVMESSGEGGRVQITETSKILLENEYPEFIIEIRGINKDVKQDDFVT 1014
Query: 356 RWVVSSSTQLSNKKNPLF 409
W+ KKN F
Sbjct: 1015 YWLTGKDEDYFKKKNNTF 1032
>Z72505-2|CAA96609.1| 340|Caenorhabditis elegans Hypothetical
protein C50C10.3 protein.
Length = 340
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = -1
Query: 603 LLPTSFSFRLITCPYHPKRALLNFSVTGATFRLPLTYYY*FRILFILVTPHIHRNI 436
++PTS +I Y + ++N + + + +Y+ F ILF + ++H N+
Sbjct: 38 IIPTSVIMIVILMKYRTAKMMMNTASMDPNIFVTIMFYFFFNILF-FIGDYVHLNL 92
>Z82086-4|CAB04998.1| 329|Caenorhabditis elegans Hypothetical
protein ZK228.7 protein.
Length = 329
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 453 HIHRNIRISAACNRLKRGFFLLL 385
H+ I ISAA NRL++ FFL +
Sbjct: 218 HLFHTISISAATNRLQKQFFLAI 240
>AF016415-7|AAW88412.1| 296|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 33 protein.
Length = 296
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 488 INSVFYSFSLLHTSIATFAYLLHAI 414
+NS FYSF +H SI F+ L+ +I
Sbjct: 165 VNSCFYSFWTIHKSIIFFSILVFSI 189
>Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical
protein F55H12.1 protein.
Length = 768
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 361 PPGVKWLLEPIDIYNVNAPPTLRYKF*GLSMVTTAAPP 248
P K + P + APPT+R +M TT APP
Sbjct: 4 PVSTKKTIAPSTMKTTVAPPTMRTTMAPTTMKTTVAPP 41
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = +2
Query: 347 LNTRWVVSSSTQLSNKKNPLFRRLHAADMRMLRWMCGVTRMNR 475
+ + W + S + S+K+ P+F + +CG+T ++R
Sbjct: 374 MTSSWSMESKKEKSSKRRPIFESTYTKFQLHSEGLCGLTDLDR 416
>Z72505-1|CAA96608.1| 338|Caenorhabditis elegans Hypothetical
protein C50C10.2 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -1
Query: 603 LLPTSFSFRLITCPYHPKRALLNFSVTGATFRLPLTYYY*FRILFILVTPHIHRNI 436
+LPT+ I Y +A LN + + +Y+ F ILF V + H N+
Sbjct: 34 ILPTTVIMIAILVKYRKAKATLNSATMDHNIFAFIMFYFLFNILF-FVADYFHLNL 88
>Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical
protein F52D10.1 protein.
Length = 737
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 590 HFHFVSSHVHTILNAHFSTSLSQVPLSDFL*HIIINSVF 474
H + SH+HTIL + FS S+ P F + N+VF
Sbjct: 37 HRNMNHSHIHTILLSLFSDLSSRFPQEKFDLALFKNAVF 75
>AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion
transporter ABTS-2 protein.
Length = 737
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 590 HFHFVSSHVHTILNAHFSTSLSQVPLSDFL*HIIINSVF 474
H + SH+HTIL + FS S+ P F + N+VF
Sbjct: 37 HRNMNHSHIHTILLSLFSDLSSRFPQEKFDLALFKNAVF 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,687,836
Number of Sequences: 27780
Number of extensions: 391178
Number of successful extensions: 835
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -