Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0900
         (767 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56439| Best HMM Match : No HMM Matches (HMM E-Value=.)              65   7e-11
SB_516| Best HMM Match : No HMM Matches (HMM E-Value=.)                28   7.2  
SB_36662| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  
SB_21668| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  

>SB_56439| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 81  LLNEVEAFALASHLFWTLWSIVNASKSQIPFGYWEYALSRFETYQRLK 224
           LL+EV+ FAL S+ FW +WS+V A  S I FGY EYA +RF++Y+R K
Sbjct: 322 LLDEVQRFALVSNFFWGMWSVVQAKMSNIEFGYLEYAFTRFDSYRRQK 369


>SB_516| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 134

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 469 NSHHFLTAI*RSVFATPPILLKTPPPSW 386
           NS +F+ ++  S     P++L+ PPP W
Sbjct: 2   NSTYFINSVSNSCSPGDPLVLERPPPRW 29


>SB_36662| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 440

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = -1

Query: 515 LVLKKIKTAPPIVHLKLTSLFNRHITISL 429
           LV K++KT+ P+V   L+S+++ H  ++L
Sbjct: 46  LVQKRLKTSQPLVRALLSSVYDLHPIVTL 74


>SB_21668| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 391

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -1

Query: 317 GPSQLGYLSYVDLAYFSFLGQTA---VVLLYDLNLETLVRFEPR 195
           GPS   YL+  D+A+FS   +TA   ++L  D N  T   F+ R
Sbjct: 187 GPSDEVYLTTSDIAWFSLDLETAHPDIILSNDNNTATCTSFDDR 230


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,429,091
Number of Sequences: 59808
Number of extensions: 486436
Number of successful extensions: 2775
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2773
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)