Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0900
(767 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g34100.1 68414.m04229 choline kinase, putative similar to cho... 66 2e-11
At1g74320.1 68414.m08606 choline kinase, putative similar to GmC... 60 1e-09
At4g09760.2 68417.m01603 choline kinase, putative similar to GmC... 60 2e-09
At4g09760.1 68417.m01602 choline kinase, putative similar to GmC... 60 2e-09
At2g26830.1 68415.m03219 choline/ethanolamine kinase family prot... 60 2e-09
At1g71697.1 68414.m08288 choline kinase, putative similar to GmC... 57 1e-08
At2g41050.1 68415.m05069 PQ-loop repeat family protein / transme... 32 0.37
At3g11130.1 68416.m01349 clathrin heavy chain, putative similar ... 31 0.64
At5g37870.1 68418.m04561 seven in absentia (SINA) family protein... 31 1.1
At3g45680.1 68416.m04937 proton-dependent oligopeptide transport... 31 1.1
At4g21350.1 68417.m03084 U-box domain-containing protein similar... 30 1.5
At3g45650.1 68416.m04931 proton-dependent oligopeptide transport... 29 2.6
At3g45710.1 68416.m04940 proton-dependent oligopeptide transport... 29 3.4
At3g45700.1 68416.m04939 proton-dependent oligopeptide transport... 29 3.4
At3g45660.1 68416.m04933 proton-dependent oligopeptide transport... 29 3.4
At1g33700.1 68414.m04167 expressed protein contains Pfam domain ... 29 4.5
At2g14960.1 68415.m01701 auxin-responsive GH3 family protein sim... 28 7.9
>At1g34100.1 68414.m04229 choline kinase, putative similar to
choline kinase (GmCK2p) GI:1438881 from [Glycine max];
contains Pfam profile PF01633: Choline/ethanolamine
kinase; could not find a suitable start codon; this may
be a pseudogene, a transposon insertion is found
immediately upstream.
Length = 267
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +3
Query: 15 LKHYSSNVSEEPQEPSIDDVNHLLNEVEAFALASHLFWTLWSIVNASKSQIPFGYWEYAL 194
+ +Y S+ EEP+E DD+ LL + E + LASHLFW LW I++ ++I F Y EY+
Sbjct: 186 IHNYLSSSGEEPKE---DDIKQLLKDAEKYTLASHLFWGLWGIISGYVNKIDFDYAEYSR 242
Query: 195 SRFETYQRLKIEVI 236
RF+ Y K E++
Sbjct: 243 QRFKQYWLRKPELL 256
>At1g74320.1 68414.m08606 choline kinase, putative similar to GmCK2p
choline kinase gi|1438881|gb|AAC49375
Length = 350
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/66 (45%), Positives = 38/66 (57%)
Frame = +3
Query: 15 LKHYSSNVSEEPQEPSIDDVNHLLNEVEAFALASHLFWTLWSIVNASKSQIPFGYWEYAL 194
LK Y S E+P + V LL +VE + LASHL W LW I++ ++I F Y EYA
Sbjct: 274 LKTYMSYSDEKPSDTM---VKKLLEDVEKYTLASHLIWGLWGIISEHVNEIDFDYMEYAR 330
Query: 195 SRFETY 212
RFE Y
Sbjct: 331 QRFEQY 336
>At4g09760.2 68417.m01603 choline kinase, putative similar to GmCK2p
choline kinase gi|1438881|gb|AAC49375
Length = 346
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = +3
Query: 21 HYSSNVSEEPQEPSIDDVNHLLNEVEAFALASHLFWTLWSIVNASKSQIPFGYWEYALSR 200
+Y ++ EE +E +D+ LL+++E + LASHLFW LW I++ ++I F Y EY+ R
Sbjct: 273 NYLTSSGEEARE---EDIEQLLDDIEKYTLASHLFWGLWGIISGYVNKIEFDYIEYSRQR 329
Query: 201 FETY 212
F+ Y
Sbjct: 330 FKQY 333
>At4g09760.1 68417.m01602 choline kinase, putative similar to GmCK2p
choline kinase gi|1438881|gb|AAC49375
Length = 346
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = +3
Query: 21 HYSSNVSEEPQEPSIDDVNHLLNEVEAFALASHLFWTLWSIVNASKSQIPFGYWEYALSR 200
+Y ++ EE +E +D+ LL+++E + LASHLFW LW I++ ++I F Y EY+ R
Sbjct: 273 NYLTSSGEEARE---EDIEQLLDDIEKYTLASHLFWGLWGIISGYVNKIEFDYIEYSRQR 329
Query: 201 FETY 212
F+ Y
Sbjct: 330 FKQY 333
>At2g26830.1 68415.m03219 choline/ethanolamine kinase family protein
similar to SP|Q9HBU6 Ethanolamine kinase (EC 2.7.1.82)
(EKI){Homo sapiens}, GmCK3p [Glycine max] GI:1438883;
contains Pfam profile PF01633: Choline/ethanolamine
kinase
Length = 374
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +3
Query: 15 LKHYSSNVSEEPQEPSIDDVNHLLNEVEAFALASHLFWTLWSIVNASKSQIPFGYWEYAL 194
+KHY ++P E SI +V + E +A+ LASHL+W +W+I+ A S I F Y Y
Sbjct: 292 IKHYLQ--PDKPDEVSIAEVESVFVETDAYKLASHLYWAIWAIIQARMSPIEFEYLGYFF 349
Query: 195 SRFETYQRLK 224
R+ Y++ K
Sbjct: 350 LRYNEYKKQK 359
>At1g71697.1 68414.m08288 choline kinase, putative similar to GmCK2p
choline kinase gi|1438881|gb|AAC49375
Length = 346
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 69 DVNHLLNEVEAFALASHLFWTLWSIVNASKSQIPFGYWEYALSRFETY 212
+V LL + E++ LA+H+FW LW I++ ++I F Y EYA RFE Y
Sbjct: 289 EVERLLKDAESYTLANHIFWGLWGIISGHVNKIEFDYMEYARQRFEQY 336
>At2g41050.1 68415.m05069 PQ-loop repeat family protein /
transmembrane family protein similar to SP|Q10482 Seven
transmembrane protein 1 {Schizosaccharomyces pombe};
contains Pfam profile PF04193: PQ loop repeat
Length = 376
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 91 RWKRSPSPATCSGRSGPLSMLPRVRYPSDTG 183
RW+ S TC G++ P++M+P + S TG
Sbjct: 125 RWRNSSDTTTCGGQTTPITMIPGSQRTSFTG 155
>At3g11130.1 68416.m01349 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1705
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/85 (22%), Positives = 35/85 (41%)
Frame = -1
Query: 314 PSQLGYLSYVDLAYFSFLGQTAVVLLYDLNLETLVRFEPRQRVFPVSEGYLTLGSIDNGP 135
P LG ++ + ++S G + V ++D + P + + +G P
Sbjct: 122 PKMLGLVTQTSVYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPNEKWLVLIGIAPGSP 181
Query: 134 ERPEQVAGEGERFHLVQQMINVIYA 60
ERP+ V G + F + QQ + A
Sbjct: 182 ERPQLVKGNMQLFSVDQQRSQALEA 206
>At5g37870.1 68418.m04561 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 281
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 181 GNTRCRGSKRTNVSRLRS*RRTTAVCPRNEKYAR-STYERYPN*LGPCSCRIK 336
G+ RCR +R S L R C + Y R ST+E+ N PCSC ++
Sbjct: 85 GHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKICN-FSPCSCPVQ 136
>At3g45680.1 68416.m04937 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 558
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -1
Query: 488 PPIVHLKLTSLFNRHITISLCNSA--HSLKNTAT*LGMVTSVRTFYVTTPSIDLIRQ 324
PP+V + + F I L SL+NTAT L V +FY++T IDLI++
Sbjct: 444 PPLVIVGIGEAFQFPANIELFYGEFPESLRNTATSLTSVVIGISFYLSTALIDLIQR 500
>At4g21350.1 68417.m03084 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582198; contains Pfam
profile PF04564: U-box domain
Length = 374
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2
Query: 518 QYTIFILNSLCCC 556
QY++FILN LCCC
Sbjct: 316 QYSLFILNCLCCC 328
>At3g45650.1 68416.m04931 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 558
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -1
Query: 488 PPIVHLKLTSLFNRHITISLCNSA--HSLKNTAT*LGMVTSVRTFYVTTPSIDLIRQ 324
PP+V + + F+ ++LC S+++TAT + V FY +T IDLI++
Sbjct: 445 PPLVIVGIGEAFHFPGNVALCYQEFPESMRSTATSITSVVIGICFYTSTALIDLIQR 501
>At3g45710.1 68416.m04940 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 560
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 455 FNRHITISLCNSAHSLKNTAT*LGMVTSVRTFYVTTPSIDLIRQ 324
F ++ + SLKNTAT L V +FY++T ID+I++
Sbjct: 459 FPANVAVFYGEFPESLKNTATSLTSVVIGISFYLSTAVIDVIQR 502
>At3g45700.1 68416.m04939 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 548
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -1
Query: 455 FNRHITISLCNSAHSLKNTAT*LGMVTSVRTFYVTTPSIDLIRQ 324
F +I I SL+NTAT L V +FY++T ID+I++
Sbjct: 447 FPANIAIFYGEFPESLRNTATSLTSVVMGISFYLSTALIDVIQR 490
>At3g45660.1 68416.m04933 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 557
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -1
Query: 488 PPIVHLKLTSLFNRHITISLCNSA--HSLKNTAT*LGMVTSVRTFYVTTPSIDLIRQ 324
PP+V + + F+ ++LC S+++TAT + V FY +T IDLI++
Sbjct: 444 PPLVIVGIGEAFHFPGNVALCYQEFPESMRSTATSITSVLIGICFYTSTALIDLIQK 500
>At1g33700.1 68414.m04167 expressed protein contains Pfam domain
PF04685: Protein of unknown function, DUF608
Length = 947
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 487 GAVLIFFNTSTIYHFYSKFAMLLLIIRIDCKL 582
G + +NT + HFYS FA+L+L +I+ +
Sbjct: 527 GVQYLMYNTYDV-HFYSSFALLMLFPKIELSI 557
>At2g14960.1 68415.m01701 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 590
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -1
Query: 314 PSQLGYLSYVDLAYFSF--LGQTAVVLLYDLNL 222
PS++ Y ++AYF F LG T V L D+N+
Sbjct: 353 PSEVSYTIMPNMAYFEFIPLGGTKAVELVDVNI 385
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,294,628
Number of Sequences: 28952
Number of extensions: 338797
Number of successful extensions: 997
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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