Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0899
(607 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_214| Best HMM Match : Arf (HMM E-Value=0) 187 5e-48
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 104 6e-23
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 100 8e-22
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 100 1e-21
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 99 1e-21
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 93 2e-19
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 88 6e-18
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 87 1e-17
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 62 4e-10
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 60 1e-09
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 58 6e-09
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34) 38 0.008
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 35 0.059
SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 32 0.31
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 32 0.31
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 32 0.41
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_38601| Best HMM Match : MMR_HSR1 (HMM E-Value=0.055) 31 0.55
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 31 0.96
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 31 0.96
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 30 1.7
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 30 1.7
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 30 1.7
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 30 1.7
SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 2.9
SB_35858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_52473| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0026) 29 3.9
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1) 28 6.7
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 28 6.7
SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8) 28 6.7
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 28 6.7
SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05) 28 6.7
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14) 28 6.7
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 28 6.7
SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056) 28 6.7
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 28 6.7
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 28 6.7
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 28 6.7
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 28 6.7
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 28 6.7
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14) 28 6.7
SB_46099| Best HMM Match : 7tm_1 (HMM E-Value=4.7e-23) 27 8.9
SB_38981| Best HMM Match : APS_kinase (HMM E-Value=0) 27 8.9
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 187 bits (456), Expect = 5e-48
Identities = 86/122 (70%), Positives = 99/122 (81%)
Frame = +2
Query: 242 LAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLP 421
+AQHVPTLHPTSEELS+G MRFTTFDLGGH+QARR+W+DYFPAV+ IVF++D D RL
Sbjct: 1 MAQHVPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLA 60
Query: 422 ESKAELDSLLTDETLSNCPVLILGNKIDKPGAASEDELRHFFNLYQQTTGKGKVSRSELP 601
ESK ELDSLL DE LS+CPVLILGNKID PGA ED +R F L+ QTTGKG V+ +L
Sbjct: 61 ESKKELDSLLADEQLSSCPVLILGNKIDIPGAVGEDYIRQNFGLFGQTTGKGSVAAKDLA 120
Query: 602 GR 607
R
Sbjct: 121 TR 122
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 104 bits (249), Expect = 6e-23
Identities = 53/134 (39%), Positives = 79/134 (58%)
Frame = +2
Query: 155 LWKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQ 334
L K +LL +GLD AGKTT+L+ LK D +PT+ E + +++FT +D+GG
Sbjct: 86 LGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEYKNIKFTVWDIGGQD 145
Query: 335 QARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPG 514
+ R +WR YF ++F+VD+ DR R+ E+K EL LL +E L +L+L NK D P
Sbjct: 146 KIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALLVLANKQDLPD 205
Query: 515 AASEDELRHFFNLY 556
+ S EL +L+
Sbjct: 206 SMSTTELSEKLSLH 219
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 103 bits (247), Expect = 1e-22
Identities = 48/125 (38%), Positives = 77/125 (61%)
Frame = +2
Query: 161 KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQA 340
KK ++L +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG +
Sbjct: 15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKNISFTVWDVGGQDKI 74
Query: 341 RRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPGAA 520
R +WR YF ++++VD+ DR R+ ESK EL+ +L ++ L + VL++ NK D P A
Sbjct: 75 RPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVLVMANKQDLPNAL 134
Query: 521 SEDEL 535
S E+
Sbjct: 135 SVSEI 139
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 100 bits (240), Expect = 8e-22
Identities = 48/123 (39%), Positives = 73/123 (59%)
Frame = +2
Query: 185 LGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYF 364
+GLDNAGKTT+L+ LK + + VPTL E ++ ++ FT +D+GG + R +WR Y+
Sbjct: 2 IGLDNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVYY 61
Query: 365 PAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPGAASEDELRHF 544
I+F+VD+ DR R E++ EL LL +E L +L++ NK D A + E+R
Sbjct: 62 QGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTASEIREK 121
Query: 545 FNL 553
L
Sbjct: 122 LKL 124
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 100 bits (239), Expect = 1e-21
Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +2
Query: 146 FLGLW-KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDL 322
F GL+ KK ++L +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+
Sbjct: 9 FAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
Query: 323 GGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKI 502
GG + R +WR YF ++F+VD+ DR R+ E++ EL+ +L ++ L + +L+ NK
Sbjct: 69 GGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQ 128
Query: 503 DKPGAASEDELRHFFNLY 556
D P A + E+ L+
Sbjct: 129 DLPNAMNAAEITDKLGLH 146
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 99 bits (238), Expect = 1e-21
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 1/147 (0%)
Frame = +2
Query: 116 ILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQH-VPTLHPTSEELSI 292
ILDWF + WK+ +L +GL +GKTT ++++ + ++ +PT+ ++S
Sbjct: 8 ILDWFKSLF-----WKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSK 62
Query: 293 GSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSN 472
G++ +D+GG + R +W Y V+ IV++VDA D +L SK EL +LL L+
Sbjct: 63 GNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAG 122
Query: 473 CPVLILGNKIDKPGAASEDELRHFFNL 553
P+L+LGNK D P + E EL NL
Sbjct: 123 IPILVLGNKKDLPNSLDEKELVERLNL 149
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELS-IGSMRFTTFDLGGHQQARRV 349
+++ LGLD AGKTT+L+ LK +PT+ E L ++ T +D+GG + R +
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKETVSTIPTIGFNVETLQPTKNVTLTIWDVGGQDKIRPL 80
Query: 350 WRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPGAASED 529
WR YF + ++F+VD+ D R+PE+K EL +L + + PV+++ NK D P A
Sbjct: 81 WRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVANKQDLPNALKAG 140
Query: 530 ELRHFFNLYQ 559
E+ L Q
Sbjct: 141 EMAKHLGLLQ 150
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 87.8 bits (208), Expect = 6e-18
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = +2
Query: 161 KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELS-IGSMRFTTFDLGGHQQ 337
K+ ++ LGLD +GKT++L+ K VPT E + +RF +D+GG +Q
Sbjct: 19 KRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQ 78
Query: 338 ARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPGA 517
R +W+ Y DA++++VD+ +L E++ EL +LL L+ P+LI NK D P A
Sbjct: 79 NRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAPILIFANKQDCPNA 138
Query: 518 ASEDELRHFFNLY 556
E+ H +L+
Sbjct: 139 IPPREITHMLSLH 151
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Frame = +2
Query: 206 KTTLLHMLKDDRLAQHVPTLHPTSEELS-IGSMRFTTFDLGGHQQARRVWRDYFPAVDAI 382
KTT+L+ LK VPT+ E +S ++ F+ +D+GG + RR+WR YF + I
Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGI 181
Query: 383 VFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPGAASEDELRHFFNLYQQ 562
+F+VD+ D+ R+ E + EL +L L+ PV+++ NK D GA D++ +LY+
Sbjct: 182 IFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDLLGAIGPDKMAEELSLYKH 241
Query: 563 TTGKGKV 583
T ++
Sbjct: 242 TKNPWRI 248
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEE---LSIGSMRFTTFDLGGHQQAR 343
++L LGLD +GK+ L L ++ T L+ + +++GG ++ R
Sbjct: 168 RILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLNLNIWEIGGDEKYR 227
Query: 344 RVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPGAAS 523
W ++ +V++VD+ D R ES+ L SLL++ L+ PVL++ +K D PGA
Sbjct: 228 AYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVASKQDLPGARQ 287
Query: 524 EDEL 535
E+
Sbjct: 288 LSEI 291
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 62.1 bits (144), Expect = 3e-10
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEEL-SIGSMRFTTFDLGGHQQARRV 349
++L LGLDN+GKTT+L L + + PT + + S G R +D+GG ++ R
Sbjct: 19 RILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSKGGFRLNVWDIGGQRKIRPY 78
Query: 350 WRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPGAASED 529
W++YF D + ELD LL +E L P+L+ NK D AA+
Sbjct: 79 WKNYFENTDIL-----------------ELDELLEEEKLIGVPLLVFANKQDLMNAATPA 121
Query: 530 EL 535
E+
Sbjct: 122 EI 123
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 61.7 bits (143), Expect = 4e-10
Identities = 26/74 (35%), Positives = 44/74 (59%)
Frame = +2
Query: 278 EELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTD 457
E + ++ FT +D+GG + R +WR YF ++F+VD+ DR R E+K EL +L +
Sbjct: 503 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAE 562
Query: 458 ETLSNCPVLILGNK 499
+ L + +L+ NK
Sbjct: 563 DELRDAVLLVFANK 576
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 60.1 bits (139), Expect = 1e-09
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = +2
Query: 317 DLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGN 496
D+GG + R +WR YF ++F+VD DR R+ E++ EL ++ D + + +LI N
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 497 KIDKP 511
K D P
Sbjct: 203 KQDLP 207
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 58.0 bits (134), Expect = 6e-09
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +2
Query: 107 KMFILDW---FTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTS 277
K+ + W F V G + + SGKL+ + + +GK ++ + + L S
Sbjct: 81 KLVFMSWQMVFMSVSGKMVIMSVSGKLVIMSV--SGKLVIMSVSGKLVIMSVSGKLVIMS 138
Query: 278 EELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTD 457
+ M + G R WR Y+ DA++++VD+ D+ R+ SK EL ++L +
Sbjct: 139 VSGKLVIMSILNSLIPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEE 198
Query: 458 ETLSNCPVLILGNKIDKPGAASEDELRHFFNL 553
+ L +++ NK D GA S E+ + L
Sbjct: 199 DELKKAILIVFANKQDMEGAMSSSEVSNALGL 230
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 302 RFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDE 460
+ +D+GG + R WR+YF + D ++++VD+ D+ RL + K EL LL +E
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 45.6 bits (103), Expect = 3e-05
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Frame = +2
Query: 152 GLWKKSGK-----LLFLGLDNAGKTTLLHMLKDD--RLAQHVP------TLHPTSEELSI 292
GLWK + +L LGLDNAGKTTLL +K + +P T+ +++I
Sbjct: 11 GLWKYLFQKDEYFILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVGLNIGKITI 70
Query: 293 GSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSN 472
++ +DLGG Q+ R +W D + + + LP +A LT + L
Sbjct: 71 SHVKLMFWDLGGQQELRTLW-DKVEVMSVKILMTRF-----LPVEEA-----LTHKALEG 119
Query: 473 CPVLILGNKID 505
P+L+L NK D
Sbjct: 120 VPLLVLANKQD 130
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 10/123 (8%)
Frame = +2
Query: 167 SGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARR 346
S K LD K L + D L PT + ++ F D+GG + RR
Sbjct: 150 SAKYYLTDLDRLAKPDYLPT-EQDVLRARAPTSGIIEYPFDLETIIFRMVDVGGQRSERR 208
Query: 347 VWRDYFPAVDAIVF----------LVDACDRPRLPESKAELDSLLTDETLSNCPVLILGN 496
W F V +I+F LV++ R+ ESKA +++T N +++ N
Sbjct: 209 KWIHCFENVTSIMFLVALSEYDQVLVESDSENRMEESKALFRTIITYPWFQNSSIILFLN 268
Query: 497 KID 505
K D
Sbjct: 269 KKD 271
>SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34)
Length = 240
Score = 37.5 bits (83), Expect = 0.008
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +2
Query: 185 LGLDNAGKTTLLHMLKDDRLAQHVP---TLHPTSEELSIGSMRFTTFDLGGHQQARRVWR 355
+G + GKT+LL +++ + + T H + + +G + D GH+ A R
Sbjct: 97 MGHVDHGKTSLLDYIRNANVIEGESGGITQHIGAYSVKVGDQKIAFLDTPGHE-AFTAMR 155
Query: 356 DYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPGA 517
V +V +V A D +P++K ++ + P++ NKIDKP A
Sbjct: 156 ARGAQVTDLVIIVVAADDDVMPQTK----EAISHAQAAGVPIIFAINKIDKPNA 205
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 36.3 bits (80), Expect = 0.019
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Frame = +2
Query: 230 KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVF------- 388
+ D L V T + + F FD+GG + R+ W F V AI+F
Sbjct: 171 EQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAY 230
Query: 389 -LVDACDRP--RLPESKAELDSLLTDETLSNCPVLILGNKID 505
LV A D R+ ES DS+ ++ ++ +++ NK D
Sbjct: 231 DLVLAEDEEMNRMMESMKLFDSICNNKWFTDTSIILFLNKKD 272
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 35.1 bits (77), Expect = 0.044
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTS---EELSI--GSMRFTTFDLGGHQQ 337
K+L +G GK++LL DD + + L++ + +D G ++
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 338 ARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDK 508
R + Y+ ++ + D R + + L+ + T + +++GNKIDK
Sbjct: 70 FRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKIDK 126
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 34.7 bits (76), Expect = 0.059
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLLHMLKDDRL-AQHVPTLHPT----SEELSIGSMRFTTFDLGGHQQ 337
K+L LG N GK++L+ DD AQ T+ +L ++ +D G ++
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 338 ARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPG- 514
R + R +F D + + D + + + S+ +++GNK DK
Sbjct: 72 YRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCDKKDK 131
Query: 515 AASEDELRHFFNLY 556
SE+++++ + Y
Sbjct: 132 KVSEEDIQNLSSCY 145
>SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +2
Query: 230 KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDA 400
K D L T E I S+ F D+GG + R W F V +I+FLV +
Sbjct: 383 KQDMLHSRKATKGIVEHEFMIKSIPFKMVDVGGQRSQRAKWFQCFDEVTSILFLVSS 439
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 32.3 bits (70), Expect = 0.31
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Frame = +2
Query: 317 DLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPE----SKAELDSLLTDETLSNCPVL 484
D+GG + R+ W +F V A+VF E + A LDSL E +++C L
Sbjct: 168 DVGGQKNQRKKWIHFFDGVTAVVFFASLSSYDEQLEEEEDTNAMLDSLDLFEEITHCEFL 227
Query: 485 ------ILGNKIDK-PGAASEDELRHFFNLYQQTTGKGK 580
+ NK+D S+ +L + F ++ T GK
Sbjct: 228 ANTQFILFLNKLDLFNKKLSKSDLSNCFPEFKGGTDPGK 266
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 32.3 bits (70), Expect = 0.31
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Frame = +2
Query: 230 KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV--DAC 403
+ D L V T + + F FD+GG + R+ W F V AI++ V A
Sbjct: 220 EQDLLRTRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAY 279
Query: 404 D--------RPRLPESKAELDSLLTDETLSNCPVLILGNKID 505
D R+ ES +S++ ++ + V++ NK D
Sbjct: 280 DLTLEEDESTNRMEESLKLFESIINNKWFVDTSVILFLNKKD 321
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 32.3 bits (70), Expect = 0.31
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Frame = +2
Query: 230 KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV--DAC 403
+ D L V T + + F FD+GG + R+ W F V AI++ V A
Sbjct: 172 EQDLLRTRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAY 231
Query: 404 D--------RPRLPESKAELDSLLTDETLSNCPVLILGNKID 505
D R+ ES +S++ ++ + V++ NK D
Sbjct: 232 DLSLEEDESTNRMEESLKLFESIINNKWFVDTSVILFLNKKD 273
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 31.9 bits (69), Expect = 0.41
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 296 SMRFTTFDLGGHQQARRVWRDYF 364
S++FT +D+GG Q+ R +WR Y+
Sbjct: 232 SLKFTIWDVGGLQKLRPLWRHYY 254
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 31.5 bits (68), Expect = 0.55
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLL-HMLKDDRLAQHVPTLH----PTSEELSIGSMRFTTFDLGGHQQ 337
K++FLG GK++L + D ++ PT+ + L +R +D G ++
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 338 ARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDK 508
R + Y +A + + D + ES + ++ DE ++I+GNK+D+
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSF-ESVGDWVKMVRDERGEKAVIIIVGNKMDE 280
>SB_38601| Best HMM Match : MMR_HSR1 (HMM E-Value=0.055)
Length = 882
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLLHMLKDD 238
KL+F+G+ N GKTTLL+ L+ +
Sbjct: 2 KLMFVGVSNIGKTTLLNQLRQE 23
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 31.1 bits (67), Expect = 0.72
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +2
Query: 296 SMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPES---KAELDSLLTDETL 466
++R + + G ++ + R Y+ DA V L D + L + K +LDS +
Sbjct: 67 TIRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSR 126
Query: 467 SNCPVLILGNKIDKPGAASEDEL 535
P +++GNK D P + E+
Sbjct: 127 KPVPCILVGNKSDLPDRPVDKEI 149
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 30.7 bits (66), Expect = 0.96
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 176 LLFLGLDNAGKTTLLHM-LKDDRLAQHVPTLH---PTSEELSIGSMRFTTFDLGGHQQAR 343
++ +G GKT LL+ +++ ++ T+ T+ E+ + T +D GH+
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWDTSGHEDYD 294
Query: 344 RVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKID 505
V + VD ++ D RP+ +S E + + N PVL++G K D
Sbjct: 295 HVRPLSYNNVDIVLICFDI-SRPKTADSILEKWIIEVCDLCPNKPVLLVGCKQD 347
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 30.7 bits (66), Expect = 0.96
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPT-SEELSIGSMR-------FTTFDLGG 328
K++F+G GK++ LH D Q P+ T + I +M +D G
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHD---QWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAG 954
Query: 329 HQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKID 505
++ R + + YF D I+ D K + S + + ++LGNK D
Sbjct: 955 QERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVS-VEEGAEEGVAKMVLGNKTD 1012
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 29.9 bits (64), Expect = 1.7
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Frame = +2
Query: 179 LFLGLDNAGKTTLLHM-LKDDRLAQHVPTL----HPTSEELSIGSMRFTTFDLGGHQQAR 343
L +G GKTT + L + +++ TL HP S G ++F +D G ++
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFG 95
Query: 344 RVWRDYFPAVDAIVFLVDACDR---PRLPESKAELDSLLTDETLSNCPVLILGNKID 505
+ Y+ + + D R +P +L+ + N P+++ GNK+D
Sbjct: 96 GLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLERVC-----ENIPIVLCGNKVD 147
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSI 292
KL+ +G+ GKTTLL LK L ++ T+ +E S+
Sbjct: 668 KLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVDEWSV 707
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLLHMLKDDRLAQ-HVPTLHPTSE--ELSIG--SMRFTTFDLGGHQQ 337
KLL +G GK++LL DD + ++ T+ + L++ +++ +D G ++
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 338 ARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKID 505
R + Y+ + IV + D + L+ +++ +++GNK D
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEE-VSEYACEGVNTILVGNKCD 124
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 308 TTFDLGGHQQARRVWRDYFPAV 373
T +DLGG + R +W+DY+ V
Sbjct: 7 TVYDLGGGAKIRGIWKDYYAEV 28
>SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 638
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 404 DRPRLPESKAELDSLLT 454
+ PRLPE+KA LD+LLT
Sbjct: 294 EMPRLPEAKATLDTLLT 310
>SB_35858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 305 FTTFDLGG-HQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLT 454
FTTFDLGG ++ +WR + AI+ L + + E +LD L+T
Sbjct: 418 FTTFDLGGCMKELPLIWRSFSTESKAILPLCFL--KSQFLEEPVDLDELMT 466
>SB_52473| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0026)
Length = 936
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 158 WKKSGKLLFLGLDNAGKTTLLHMLKD 235
W G + LG N+GKTTL + D
Sbjct: 281 WDHDGDIYMLGCSNSGKTTLFNTFMD 306
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -3
Query: 446 TSLVQPWTPADVAGHTRRPGTLSRPPRGSSRATHDAPADAHRGRT 312
T+ + P P + RPG + PPR S P + RG +
Sbjct: 1733 TTFIDPRLPVNTTDRRPRPGPETEPPRRSRAPPPRPPPPSSRGHS 1777
>SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1)
Length = 132
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 371 VDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLI 487
V +VF+VDA +R R+ E ++ L + +S P+LI
Sbjct: 36 VFGVVFVVDASNRERMDECRSILHETKQNPRVSGKPLLI 74
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 579 IPLHWQKRVYEDLLRDEALG 598
>SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 471
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 272 IPLHWQKRVYEDLLRDEALG 291
>SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8)
Length = 304
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 154 IPLHWQKRVYEDLLRDEALG 173
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 620 IPLHWQKRVYEDLLRDEALG 639
>SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 176 IPLHWQKRVYEDLLRDEALG 195
>SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05)
Length = 288
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 25 IPLHWQKRVYEDLLRDEALG 44
>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 593 IPLHWQKRVYEDLLRDEALG 612
>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
Length = 1447
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 588 IPLHWQKRVYEDLLRDEALG 607
>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
Length = 1026
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 325 IPLHWQKRVYEDLLRDEALG 344
>SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056)
Length = 437
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 131 IPLHWQKRVYEDLLRDEALG 150
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 622 IPLHWQKRVYEDLLRDEALG 641
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 608 IPLHWQKRVYEDLLRDEALG 627
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 546 IPLHWQKRVYEDLLRDEALG 565
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 680 IPLHWQKRVYEDLLRDEALG 699
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 27.9 bits (59), Expect = 6.7
Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 5/148 (3%)
Frame = +2
Query: 173 KLLFLGLDNAGKTTLLHMLKDDRLAQH--VPTLHPTSEELSIGSMRFTTF--DLGGHQQA 340
K++F+G N GKT+ L+ S+ + I R+T D G
Sbjct: 11 KVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDTPGTMHP 70
Query: 341 RRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKIDKPGAA 520
R + +F + D +R ++ + ET S+ P +++GNK++ +
Sbjct: 71 RIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLET-SDVPKVLVGNKMELRCSQ 129
Query: 521 SED-ELRHFFNLYQQTTGKGKVSRSELP 601
E +L + T K +S +P
Sbjct: 130 QESTDLGQTHDCVPFTEAKALACKSNIP 157
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 177 IPLHWQKRVYEDLLRDEALG 196
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 603 IPLHWQKRVYEDLLRDEALG 622
>SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14)
Length = 865
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 533 VRLHWQHRVYQSCCRESAQG 474
+ LHWQ RVY+ R+ A G
Sbjct: 69 IPLHWQKRVYEDLLRDEALG 88
>SB_46099| Best HMM Match : 7tm_1 (HMM E-Value=4.7e-23)
Length = 343
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 384 CSWSTRVTGHVCRSPRLN*TRCSL 455
C W R +G + ++ ++N T+CSL
Sbjct: 311 CGWRERRSGKIIKTSQINETQCSL 334
>SB_38981| Best HMM Match : APS_kinase (HMM E-Value=0)
Length = 578
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 182 FLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMR 304
F GL AGKTTL L+D Q +P + + G R
Sbjct: 81 FTGLSGAGKTTLSMALEDYLCRQGIPAYTLDGDNMRTGLNR 121
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,103,955
Number of Sequences: 59808
Number of extensions: 367514
Number of successful extensions: 1216
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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