Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0897
         (801 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CA448 Cluster: hypothetical protein TTHERM_0049...    35   2.1  
UniRef50_Q4XC24 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_Q8IDL5 Cluster: Putative uncharacterized protein PF13_0...    33   6.3  

>UniRef50_UPI00006CA448 Cluster: hypothetical protein
           TTHERM_00497080; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00497080 - Tetrahymena
           thermophila SB210
          Length = 1797

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 22/68 (32%), Positives = 35/68 (51%)
 Frame = +3

Query: 102 SSLSIRYVNRNQDSIIESTIIKAGNVTFGQLLVNQKNELLTLYSIGSHKTLLNDILDK*Q 281
           S+L + + +  Q+ I  +T      V    LL+N +NE + L+ IGS+K + N IL    
Sbjct: 135 SALKVNFFSSYQNLIFLTTTYSGIYVFEQMLLLNNQNEQVFLFEIGSYKQMQNTILMTSD 194

Query: 282 VKY*PLFN 305
            +Y  L N
Sbjct: 195 GQYLVLLN 202


>UniRef50_Q4XC24 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 155

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
 Frame = +1

Query: 274 NNRLSINLYL-----MQVFLIVFFEGDDYIQINLYRH---INNIFLSKYTDWPPLIIDDS 429
           + +  I LYL     ++ FL+V    D Y +  L      +N  FL  Y   P   I+D 
Sbjct: 42  DQKKKIELYLKIWNRLRSFLLVLLNFD-YFENKLENKLSIVNTFFLFTYDIVPKKNIEDM 100

Query: 430 IDKYY-IFKE*KTDCGYIVIVGKRNENIHNM 519
           + KY+ ++K+ +T C ++    K N+NI  M
Sbjct: 101 LKKYHLVYKQKETFCNFLQNFKKNNDNIDYM 131


>UniRef50_Q8IDL5 Cluster: Putative uncharacterized protein PF13_0254;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PF13_0254 - Plasmodium falciparum (isolate 3D7)
          Length = 3855

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +1

Query: 346  IQINLYRHINNIFLSKYTDWPPLIIDDSIDKYYIFKE*KTDCGYIVIVGKRNENIHNMLF 525
            I IN     N+IF  K+ +   ++++  ID +YI  + K  C ++  + K   N HN  F
Sbjct: 2919 ININKIEKCNDIFDYKFYNVSLILLNILIDLFYISNDIKCKCFFLHCLCKILSNYHNSHF 2978

Query: 526  TN 531
             N
Sbjct: 2979 IN 2980


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,684,179
Number of Sequences: 1657284
Number of extensions: 11895456
Number of successful extensions: 22323
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22318
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)