Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0897
         (801 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13019-10|AAC24442.1|  757|Caenorhabditis elegans Hypothetical p...    31   0.73 
Z81455-3|CAB03808.2|  890|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AL032623-19|CAA21519.2|  890|Caenorhabditis elegans Hypothetical...    30   2.2  
Z98851-3|CAB11538.2|  659|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    29   5.1  

>U13019-10|AAC24442.1|  757|Caenorhabditis elegans Hypothetical
           protein T12A2.2 protein.
          Length = 757

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +1

Query: 274 NNRLSINLYLMQVFLIVFFEGDDYIQINLYRHINNIFLSKYTDWPPLIIDDSIDKYYIFK 453
           N R  I++ L+ +FL++F     Y+  N Y H + +  S   +   +I+DD  + Y+  +
Sbjct: 477 NVRTIISIILV-IFLLMFVVHATYVTSNAYSHPSVVLQSSTNNGDRIIMDDFREAYHWLR 535

Query: 454 E*KTD 468
           E   D
Sbjct: 536 ENTAD 540


>Z81455-3|CAB03808.2|  890|Caenorhabditis elegans Hypothetical
           protein B0399.2 protein.
          Length = 890

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
 Frame = -1

Query: 501 VTFTDNHNIPTIRFSFFKNVILVN*VVYYQRWP-ICIFGQKNVIDMAIQIDLNIIVSFEE 325
           V F +N    T++ S    +  ++ V+Y   WP I IF +  +   A+ I L +++S   
Sbjct: 268 VIFLENKTCGTLKSSILCYLGDISYVMYLVHWPVIAIFKESTIQSHAVCIALTLLISVVA 327

Query: 324 YD*KNLH*IKVNT*P----VIYLRCRSEEFYDCQWNTKS 220
           +       +K+ T P    ++ L C +      QW+T++
Sbjct: 328 HHLYEKQYLKLGTKPTALLILLLICLNGA---AQWSTRT 363



 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 316 LIVFFEGDDYIQINLYRHINNIFLSKYTDWPPLII 420
           L V   G+ Y++ NL  HI   F S Y+DW  L I
Sbjct: 426 LSVMLVGNSYVE-NLDGHIRAQFRSNYSDWTSLFI 459


>AL032623-19|CAA21519.2|  890|Caenorhabditis elegans Hypothetical
           protein B0399.2 protein.
          Length = 890

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
 Frame = -1

Query: 501 VTFTDNHNIPTIRFSFFKNVILVN*VVYYQRWP-ICIFGQKNVIDMAIQIDLNIIVSFEE 325
           V F +N    T++ S    +  ++ V+Y   WP I IF +  +   A+ I L +++S   
Sbjct: 268 VIFLENKTCGTLKSSILCYLGDISYVMYLVHWPVIAIFKESTIQSHAVCIALTLLISVVA 327

Query: 324 YD*KNLH*IKVNT*P----VIYLRCRSEEFYDCQWNTKS 220
           +       +K+ T P    ++ L C +      QW+T++
Sbjct: 328 HHLYEKQYLKLGTKPTALLILLLICLNGA---AQWSTRT 363



 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 316 LIVFFEGDDYIQINLYRHINNIFLSKYTDWPPLII 420
           L V   G+ Y++ NL  HI   F S Y+DW  L I
Sbjct: 426 LSVMLVGNSYVE-NLDGHIRAQFRSNYSDWTSLFI 459


>Z98851-3|CAB11538.2|  659|Caenorhabditis elegans Hypothetical
           protein H12I19.4 protein.
          Length = 659

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 316 LIVFFEGDDYIQINLYRHINNIFLSKYTDWPPLIIDDSIDKYY 444
           L V   G+ Y+ +N   HI + F   Y++W  L + DS   +Y
Sbjct: 431 LSVMALGNSYV-LNFNDHIRSQFNYNYSEWRSLFVRDSFGFFY 472


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = +3

Query: 90  KCIRSSLSIRYVNRNQDSIIESTIIKAGNVTFGQLLVNQKNELLTLYSIGSHKTL 254
           +C   +LS+  +    D ++  +  K  N  FG+L+VN  +++   +S  + +TL
Sbjct: 165 RCEDENLSLTQLQSIYDRLVSMSRAKKINALFGKLIVNDIHQIRKAFSCFNIRTL 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,638,278
Number of Sequences: 27780
Number of extensions: 299668
Number of successful extensions: 557
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)