Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0896
         (337 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0046 + 12830974-12832386                                         28   2.2  
12_01_0231 + 1744323-1745276,1745516-1746193                           27   5.0  
11_01_0234 + 1804581-1805357,1805941-1806447                           26   6.6  
08_01_0002 - 20208-20594,21525-21671,21754-21917,22005-22162,245...    26   6.6  
03_03_0069 + 14252184-14252810,14252876-14253523                       26   6.6  
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664...    26   8.7  
07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595           26   8.7  

>12_02_0046 + 12830974-12832386
          Length = 470

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 262 SST*KVVNNKSQI*IIESKNFKRKFHNSFLSQILMEYNMC 143
           S T K + N+  I + E+KNF+ K   +    ++ EY++C
Sbjct: 95  SQTSKDIKNREGIKVGEAKNFRFKKDGTNTDWLMEEYHLC 134


>12_01_0231 + 1744323-1745276,1745516-1746193
          Length = 543

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 250 KVVNNKSQI*IIESKNFKRKFHNSFLSQILMEYNMC 143
           K V NK+ + + E++NF+ K   S+   ++ E++ C
Sbjct: 443 KEVKNKAGVKVGETQNFRFKKDGSYTDWLMEEHHCC 478


>11_01_0234 + 1804581-1805357,1805941-1806447
          Length = 427

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 250 KVVNNKSQI*IIESKNFKRKFHNSFLSQILMEYNMC 143
           K V NK+ + + E++NF+ K   S+   ++ E++ C
Sbjct: 327 KGVKNKAGVKVGETQNFRFKKDGSYTDWLMEEHHCC 362


>08_01_0002 -
           20208-20594,21525-21671,21754-21917,22005-22162,
           24533-24826,24916-25121,25216-25812,26366-27097
          Length = 894

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +3

Query: 153 YSINICDRKELWNFLLKFLLSIIYIWDLLL 242
           + + + ++   W FLL  LL+ +YIW+ ++
Sbjct: 99  FMLGLANKLMGWFFLLLSLLAAMYIWEFVM 128


>03_03_0069 + 14252184-14252810,14252876-14253523
          Length = 424

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +3

Query: 198 LKFLLSIIYIWDLLLTTFHVLLFIGYNLRTKFVLNPIT 311
           ++ + ++I +WD +L   H+L   G  +    + NP+T
Sbjct: 118 VRSMTAVIGLWDGILCAAHILFGPGRGVERYVLCNPLT 155


>09_06_0328 +
           22365308-22365415,22365743-22366018,22366166-22366417,
           22366542-22366939,22367028-22368021,22368199-22368409,
           22368515-22368749,22368874-22368996,22369190-22369310,
           22369416-22369625
          Length = 975

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 171 DRKELWNFLLKFLLSIIYIWDLLLTT 248
           D  E W  LL     ++YIWDL   T
Sbjct: 699 DCDECWKLLLVTRRGLMYIWDLYTRT 724


>07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595
          Length = 904

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +3

Query: 186 WNFLLKFLLSIIYIWDLLLTTFHVLLFIGYNLRT 287
           W F++ +  S++++   L     VL+ + YN+ T
Sbjct: 490 WLFIVNYFFSLVFVSTYLAAIIVVLVDVEYNMGT 523


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,401,892
Number of Sequences: 37544
Number of extensions: 100726
Number of successful extensions: 149
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)