Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0896
         (337 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92782-3|CAB07189.2|  326|Caenorhabditis elegans Hypothetical pr...    30   0.36 
Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical pr...    29   0.83 
Z82052-8|CAD89751.2|  325|Caenorhabditis elegans Hypothetical pr...    28   1.4  
Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical pr...    28   1.9  
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ...    28   1.9  
AF130443-1|AAD28468.1|  956|Caenorhabditis elegans EAG K+ channe...    27   3.3  
AF036695-1|AAB88348.2|  956|Caenorhabditis elegans Egg laying de...    27   3.3  
Z81489-9|CAE17759.1|  326|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z81463-6|CAD89721.1|  351|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z72505-6|CAA96613.2|  358|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z32681-3|CAD88217.1|  685|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z32681-2|CAA83607.1|  687|Caenorhabditis elegans Hypothetical pr...    26   5.8  
U55364-3|AAN84821.1|  349|Caenorhabditis elegans Hypothetical pr...    26   5.8  
AF216966-1|AAF23508.1|  358|Caenorhabditis elegans seven transme...    26   5.8  
AF173373-1|AAD51973.1|  687|Caenorhabditis elegans transmembrane...    26   5.8  
AF016681-6|AAB66175.2|  317|Caenorhabditis elegans Hypothetical ...    26   5.8  
Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical p...    26   7.7  
Z82260-2|CAB05130.1|  344|Caenorhabditis elegans Hypothetical pr...    26   7.7  
U29244-19|AAC71098.1|   95|Caenorhabditis elegans Hypothetical p...    26   7.7  

>Z92782-3|CAB07189.2|  326|Caenorhabditis elegans Hypothetical
           protein F14F8.4 protein.
          Length = 326

 Score = 30.3 bits (65), Expect = 0.36
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
 Frame = +3

Query: 195 LLKFLLSIIYIWDLLLTTFHVLLF---IGYNLRTKFVLNPITFLNSI 326
           LL +LL+ +YI  +L  TFHV+LF   I  +L+  F  N +   NSI
Sbjct: 99  LLTYLLAGLYINYILQQTFHVILFLLAILNSLKYLFPFNSVYSQNSI 145


>Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical
           protein F49H6.11 protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 159 INICDRKELWNFLLKFLLSIIYIWDLLLTTFHVLLF 266
           + I + + L   +  F L +IYI  +L  TFH+LLF
Sbjct: 89  LGIQNDENLMKIVAVFTLFLIYILHILQQTFHLLLF 124


>Z82052-8|CAD89751.2|  325|Caenorhabditis elegans Hypothetical
           protein T25E12.13 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 174 RKELWNFLLKFLLSIIYIWDLLLTTFHVLLFIGYNLRTKFVLNPITFLNSIEFL 335
           R  LW   + F+ SI YI+ +L  T H+LLF+   + +    +P+ F    ++L
Sbjct: 93  RMILWIPFIFFMASI-YIFHILQQTIHLLLFLLAIINSLKYRSPLHFAFKAQYL 145


>Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical
           protein F14F8.12 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 192 FLLKFLLSIIYIWDLLLTTFHVLLFI 269
           F+L F++ + YI  +L  TFHV+LF+
Sbjct: 75  FILLFII-LFYILHILQQTFHVILFL 99


>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
            protein Y53C10A.9 protein.
          Length = 1564

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 216  IIYIWDLLLTTFHVLLFIGY 275
            ++++WD LL TF +L  IG+
Sbjct: 1037 VVFLWDFLLFTFFLLYTIGF 1056


>AF130443-1|AAD28468.1|  956|Caenorhabditis elegans EAG K+ channel
           EGL-2 protein.
          Length = 956

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 219 IYIWDLLLTTFHVLLFIGYNLRTKFVLNPITFLNSIE 329
           I+ W +L  TF+    + +N+  K  L P   ++S E
Sbjct: 218 IWDWSILALTFYTAFMVPFNIAFKNSLRPFYLISSRE 254


>AF036695-1|AAB88348.2|  956|Caenorhabditis elegans Egg laying
           defective protein 2 protein.
          Length = 956

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 219 IYIWDLLLTTFHVLLFIGYNLRTKFVLNPITFLNSIE 329
           I+ W +L  TF+    + +N+  K  L P   ++S E
Sbjct: 218 IWDWSILALTFYTAFMVPFNIAFKNSLRPFYLISSRE 254


>Z81489-9|CAE17759.1|  326|Caenorhabditis elegans Hypothetical
           protein C55A1.12 protein.
          Length = 326

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 165 ICDRKELWNFLLKFL-LSIIYIWDLLLTTFHVLLFI 269
           IC  K ++NF LK L +S  YI  +   TFH+L+F+
Sbjct: 86  ICKFK-IFNFPLKALNISTFYIAYVSTQTFHLLIFL 120


>Z81463-6|CAD89721.1|  351|Caenorhabditis elegans Hypothetical
           protein C06B8.9 protein.
          Length = 351

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 174 RKELWNFLLKFLLSIIYIWDLLLTTFHVLLFIGYNLRTKFV 296
           R +LW F    + S + I  ++++ FH+L+ I  +LRT  V
Sbjct: 9   RYKLWVFFWN-IASHLQIVGIVVSVFHLLILIRKSLRTSAV 48


>Z72505-6|CAA96613.2|  358|Caenorhabditis elegans Hypothetical
           protein C50C10.7 protein.
          Length = 358

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 186 IIPFCHKY*WNIICAMY 136
           I+PFC+   W +IC +Y
Sbjct: 139 ILPFCYGILWGVICWIY 155


>Z32681-3|CAD88217.1|  685|Caenorhabditis elegans Hypothetical
           protein F56F3.2b protein.
          Length = 685

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 9/34 (26%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +3

Query: 132 VNT*HILYSINI-CDRKELWNFLLKFLLSIIYIW 230
           V++ ++ Y++ + C+ +  W+F+   LL I+ +W
Sbjct: 196 VSSIYLPYNLKVECESQNRWSFVTVLLLIILMVW 229


>Z32681-2|CAA83607.1|  687|Caenorhabditis elegans Hypothetical
           protein F56F3.2a protein.
          Length = 687

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 9/34 (26%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +3

Query: 132 VNT*HILYSINI-CDRKELWNFLLKFLLSIIYIW 230
           V++ ++ Y++ + C+ +  W+F+   LL I+ +W
Sbjct: 196 VSSIYLPYNLKVECESQNRWSFVTVLLLIILMVW 229


>U55364-3|AAN84821.1|  349|Caenorhabditis elegans Hypothetical
           protein F21C10.12 protein.
          Length = 349

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +3

Query: 147 ILYSINICDRKELWNFLLKFLLSIIYIWDLLLTTFHV-LLFIGYNLRTKF 293
           +LYS++ICD   L   L  + +S + IWD +   + +  +FI ++  TKF
Sbjct: 45  LLYSLSICDIFVLLFALPLYSISYLPIWDNVYGAWSMRRMFIAFS--TKF 92


>AF216966-1|AAF23508.1|  358|Caenorhabditis elegans seven
           transmembrane receptor 2 protein.
          Length = 358

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 186 IIPFCHKY*WNIICAMY 136
           I+PFC+   W +IC +Y
Sbjct: 139 ILPFCYGILWGVICWIY 155


>AF173373-1|AAD51973.1|  687|Caenorhabditis elegans transmembrane
           protein NDG-4 protein.
          Length = 687

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 9/34 (26%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +3

Query: 132 VNT*HILYSINI-CDRKELWNFLLKFLLSIIYIW 230
           V++ ++ Y++ + C+ +  W+F+   LL I+ +W
Sbjct: 196 VSSIYLPYNLKVECESQNRWSFVTVLLLIILMVW 229


>AF016681-6|AAB66175.2|  317|Caenorhabditis elegans Hypothetical
           protein F22E5.11 protein.
          Length = 317

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 195 LLKFLLSIIYIWDLLLTTFHVLLFIGYNLRTKFVL 299
           LLK +  I++I  L++ T H+L    Y+L+ +F L
Sbjct: 57  LLKLIFLILFIV-LVVFTLHILFTNSYHLKLEFAL 90


>Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical
           protein F14F8.13 protein.
          Length = 328

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 216 IIYIWDLLLTTFHVLLFIGYNLRTKFVLNPITFLN 320
           I YI  +L  TFHV+LF+   L +   +    FLN
Sbjct: 109 IFYILHVLQQTFHVILFLLAILNSLKYIFSFLFLN 143


>Z82260-2|CAB05130.1|  344|Caenorhabditis elegans Hypothetical
           protein C32H11.3 protein.
          Length = 344

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 206 FAFDNLYLGFIINYLSRTTFY 268
           FAFD+ Y G  IN L   TFY
Sbjct: 302 FAFDSTYNGSTINSLLPLTFY 322


>U29244-19|AAC71098.1|   95|Caenorhabditis elegans Hypothetical
           protein ZK1248.17 protein.
          Length = 95

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 77  TNSTKTYLKNKTTNMIKL 130
           T  T  +LKNKTTNM +L
Sbjct: 22  TRITSRFLKNKTTNMKRL 39


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,450,772
Number of Sequences: 27780
Number of extensions: 116336
Number of successful extensions: 305
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)