Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0895
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0099 - 5614007-5614233,5614725-5614998,5615086-5616179,561... 31 0.95
02_01_0140 + 1014594-1016048 30 2.2
01_03_0181 + 13523172-13524641 29 2.9
07_01_0445 - 3365244-3366227 29 3.9
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 29 3.9
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662... 29 5.1
03_01_0241 - 1866625-1868082,1868892-1869080 29 5.1
03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268 28 8.9
>03_02_0099 -
5614007-5614233,5614725-5614998,5615086-5616179,
5616674-5616772,5617371-5617389
Length = 570
Score = 31.1 bits (67), Expect = 0.95
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Frame = -1
Query: 424 VIPIKSSGDSFIKLKNTLLNINFYYEDIE--------------DADGKVHWK--IFNHDV 293
++P+K SG+ K+ + ++ +YE ++ DA K+ WK F+ D
Sbjct: 247 LLPVKGSGEEIEKISSNNISYESHYEKLKANGASCLAISCELLDAIAKIPWKAPCFSGDS 306
Query: 292 EYEVEKAVFRLENLLNDKNLGEQINKILNGLSQQIVD----EVGPTI 164
E+ V + + E+ L N ++ KIL G + ++D V PTI
Sbjct: 307 EWIVGASASKGEHRLCIWNRSGRLVKILEGPKEALIDIAWHPVDPTI 353
>02_01_0140 + 1014594-1016048
Length = 484
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 675 FTSFHWAILKEVYHPWTLCTWRTWWFMSLIETVSKLCSR 559
F H L E Y P T+CTWR W E +++ SR
Sbjct: 242 FLVIHSYGLTETYGPATVCTWRPEWDALPAEERARIKSR 280
>01_03_0181 + 13523172-13524641
Length = 489
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 675 FTSFHWAILKEVYHPWTLCTWRTWWFMSLIETVSKLCSR 559
F H L E Y P T+CTW+ W E +++ SR
Sbjct: 236 FLVIHSYGLTETYGPATVCTWKPEWDALTAEERARIKSR 274
>07_01_0445 - 3365244-3366227
Length = 327
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 358 FYYEDIEDADGKVHWKIFNHDVEYEVEKAVFRLENL 251
F+ + +DAD V WK +D E+++ ++R +L
Sbjct: 33 FHVDLPDDADAAVEWKDVTYDAEHDLNARLYRPRHL 68
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = -1
Query: 721 DPNLNDCA--LKSARNSVHQFSLGDPERGLPPLDPLYVEN----MVVYVPNRNG 578
DP +C L ++ V SLG+P+RG P LD V + + VP++NG
Sbjct: 18 DPRRKECKHELGKPKSLVPGISLGEPQRGEPSLDEALVGHGAGPVGFDVPDKNG 71
>10_08_0894 - 21365629-21365766,21365849-21365950,21366042-21366284,
21366685-21366813,21366999-21367103,21367196-21367387,
21367486-21367639,21368148-21368209,21368291-21368437,
21368517-21368564,21369091-21369228,21369305-21369451,
21370579-21370665,21370754-21370861,21370941-21371041,
21371870-21371996,21372820-21372936,21373029-21373106,
21373240-21373284,21373637-21373756,21373838-21373964,
21374033-21374253,21374347-21374529,21374772-21374924,
21375051-21375146,21375226-21375331,21375410-21375492,
21375576-21375728,21375819-21376058,21376367-21376414,
21376782-21376928,21377007-21377115,21377200-21377345,
21377715-21377809,21377944-21378049,21378177-21378368,
21378456-21378686,21378772-21378866,21379426-21379529,
21380040-21380284,21380300-21380347,21380376-21380480,
21380630-21380767,21381458-21381649,21381738-21381914,
21382001-21382129,21382203-21382316,21382407-21382746,
21382836-21383064,21383155-21383455,21384311-21384358,
21387963-21388355
Length = 2493
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = -1
Query: 538 SSLTLQNLKFDMDKKIIAAQALVNLDVNNTYDLS 437
+S+ +N++ DKK+++ + LVN + NN D++
Sbjct: 1916 ASVKDENIRQSRDKKVLSGRPLVNKEENNANDVA 1949
>03_01_0241 - 1866625-1868082,1868892-1869080
Length = 548
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 675 FTSFHWAILKEVYHPWTLCTWRTWWFMSLIETVSKLCSR 559
F +H L E Y P T+CTW W E ++L +R
Sbjct: 318 FVLYHIYGLTETYGPATVCTWMPEWDALPAEERARLKAR 356
>03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268
Length = 574
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 675 FTSFHWAILKEVYHPWTLCTWRTWWFMSLIETVSKLCSR 559
F H L E Y P T+C W+ W +E S+L R
Sbjct: 342 FRVTHTYGLSETYGPSTVCAWKPEWDRLPLEERSRLHCR 380
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,044,188
Number of Sequences: 37544
Number of extensions: 328949
Number of successful extensions: 852
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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