Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0895
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY629351-1|AAV41218.1|  513|Homo sapiens DHHC domain-containing ...    35   0.35 
AK172751-1|BAD18737.1|  653|Homo sapiens protein ( Homo sapiens ...    31   5.7  

>AY629351-1|AAV41218.1|  513|Homo sapiens DHHC domain-containing
           zinc finger protein protein.
          Length = 513

 Score = 34.7 bits (76), Expect = 0.35
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -1

Query: 424 VIPIKSSGDSFIKLKNTLLNINFYYEDIEDADGKVHWKIFNH 299
           +I + +SGD    +K+ LL+I+F Y      D   H+ +FNH
Sbjct: 206 LIKLTASGDKKSNIKSLLLDIDFRYSQFYMEDSFCHYNMFNH 247


>AK172751-1|BAD18737.1|  653|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23912 fis, clone CAE04210, highly similar to
           Homo sapiens leucine rich repeat containing 4 (LRRC4).
           ).
          Length = 653

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
 Frame = -2

Query: 675 FTSFHWAILKEVYH-PWTL-CT--WRTWWFMSLIETVSKLCSR 559
           FT   + +   ++H PW   C   W  WWF   I T S  C R
Sbjct: 286 FTPLRYLVELHLHHDPWNCDCDILWLAWWFREYIPTNSTCCGR 328


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,960,085
Number of Sequences: 237096
Number of extensions: 1850903
Number of successful extensions: 3565
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3565
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)