Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0895
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    77   1e-16
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.3  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 77.4 bits (182), Expect = 1e-16
 Identities = 54/222 (24%), Positives = 112/222 (50%), Gaps = 6/222 (2%)
 Frame = -1

Query: 733 CSRKDPN--LNDCALKSARNSVHQFSLGDPERGLPPLDPLYVENMVVYVPNRN-GFKVVF 563
           C R  P    N C  ++ R++V   + G     + P++PL V+++ +     +   +  +
Sbjct: 31  CDRSLPQKEYNQCIAEAVRDAVVSLAGGLKSFKILPIEPLAVDSVKIGESQGSVTLRQEY 90

Query: 562 KDNYFTGLS-SLTLQNLKFDMDKKIIAAQAL-VNLDVNNTYDLSGRILVIPIKSSGDSFI 389
           K+    GL+ +L ++N   D DK I+++++    +D    Y + G++L++P++ +G S I
Sbjct: 91  KNIKLYGLTKNLEIKNYNIDWDKCILSSESYNPQVDFVADYKIEGKVLLLPVRGAGKSNI 150

Query: 388 KLKNTLLNINFYYEDIEDADGKVHWKIFNHDVEYEVEKAVFRLENLLN-DKNLGEQINKI 212
            + +   + + Y E  E  +G+ + +I  H V++   K   R ENL + +K LGEQ+N+ 
Sbjct: 151 TMYDLKSHNDIYCEKYEK-NGETYLRIKKHAVKFNPAKVKLRFENLFDGNKELGEQMNRF 209

Query: 211 LNGLSQQIVDEVGPTICGSLMKAVVENLGILLEQVSFDELMP 86
           +N  S+ +  E+      +      +    +  +V FD++ P
Sbjct: 210 INENSELLFKELQAAYEETFSLVFTKIDNEIFNRVPFDKIFP 251


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 241 KNLGEQINKILNGLSQQIVDEVGPT 167
           KN    +N++ +G   ++VD+ GPT
Sbjct: 35  KNAVCALNELKSGAVYKVVDQTGPT 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,106
Number of Sequences: 438
Number of extensions: 3927
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)