Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0894
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0364 - 9457747-9458043,9459815-9459952,9460072-9460141,946...   207   9e-71
09_02_0449 - 9461385-9461431,9461487-9461628,9461733-9461831,946...    31   1.1  
12_02_1189 - 26804775-26804930,26805020-26805123,26805346-268056...    29   4.3  
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859     28   7.5  
03_05_1149 + 30753463-30754695,30754834-30755017,30755321-307565...    28   7.5  
07_01_0505 - 3759254-3759490,3759846-3759989,3760135-3760347,376...    28   9.9  

>02_02_0364 -
           9457747-9458043,9459815-9459952,9460072-9460141,
           9460928-9460995,9462451-9462582
          Length = 234

 Score =  207 bits (506), Expect(2) = 9e-71
 Identities = 92/152 (60%), Positives = 119/152 (78%), Gaps = 4/152 (2%)
 Frame = +2

Query: 194 LCTGNLC----TKDSYDYLKTLASDVHVVRGDFDENATYPEQKVVTVGQFRIGLIHGHQV 361
           LC G  C    TK+ +DYLK+L  D+H+ RG++DE+A YPE K +T+GQF++GL HGHQV
Sbjct: 78  LCIGLTCYQDDTKEVHDYLKSLCPDLHITRGEYDEDARYPETKTLTIGQFKLGLCHGHQV 137

Query: 362 VPWGDEESLALIQRQLDVDILISGHTHRFEAYEHENKFYINPGSATGGYSPLYRDPTPSF 541
           VPWGD +SLA++QRQLDVDIL++GHTH+F+AY+HE    INPGSATG YS +  D  PSF
Sbjct: 138 VPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSITYDVNPSF 197

Query: 542 VLMDIQSSTVVTYVYKLLGDEVKVERIEYKKT 637
           VLMDI    VV YVY+L+  EVKV++I++KKT
Sbjct: 198 VLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 229



 Score = 78.2 bits (184), Expect(2) = 9e-71
 Identities = 31/43 (72%), Positives = 38/43 (88%)
 Frame = +2

Query: 92  MLVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCTGNLCTK 220
           +LVL LGDLH+PHR + LPAKFK +L+PG+IQHI+CTGNLC K
Sbjct: 2   VLVLALGDLHVPHRAADLPAKFKSMLVPGKIQHIICTGNLCIK 44


>09_02_0449 -
           9461385-9461431,9461487-9461628,9461733-9461831,
           9462052-9462100,9462179-9462212,9462880-9463055,
           9463094-9463532,9463784-9463971,9463988-9464496
          Length = 560

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 576 PTFTSSSVMKSKLKELNTRRHDLLYVPPFSNMSEYYNRSVTLVYEF 713
           PT  S  V    L   NT   D+ Y+PPF    + Y R + +VY F
Sbjct: 515 PTMRSVVVALMALTA-NTDLRDMDYLPPFLRTVKIYKRKIRIVYAF 559


>12_02_1189 -
           26804775-26804930,26805020-26805123,26805346-26805610,
           26805697-26805795,26806284-26806425,26806516-26806621,
           26806718-26806785,26806870-26806929,26807292-26807566,
           26807671-26807748,26808137-26808391,26809167-26809199,
           26809312-26809444,26810060-26810202,26810249-26810327,
           26810434-26810533,26811278-26811521,26811620-26811735,
           26811845-26812004,26812347-26812574
          Length = 947

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 655 GTYNRSCLLVFNSFNFDFITEELVNVGDHCRT 560
           G + R C+L FN+  F+ +   L N+ ++C +
Sbjct: 152 GVFLRCCILSFNTMTFEGVCHLLANLVEYCNS 183


>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
          Length = 429

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = -3

Query: 420 MSTSSCLCIKARDSSSPQGTTW----CP*ISPMRNCPTVTTF--CSGYVAFSSKSPL 268
           +ST + + +KA+ S   + T W     P  S   +  + TT   CS   +FSS SPL
Sbjct: 223 LSTEALVPVKAKRSKRSRATAWSLSGAPPFSDSTSSSSTTTTSSCSSSASFSSFSPL 279


>03_05_1149 +
           30753463-30754695,30754834-30755017,30755321-30756549,
           30756702-30756816,30757126-30758084
          Length = 1239

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -2

Query: 358 LVSMNQSNAELSNCDDFLLWICRILIKISPNNMHITGQSLQI 233
           ++  NQS  +L+ CDD   WI  I +  +P  +H+ G++ +I
Sbjct: 396 MLETNQSLLQLAICDDVNPWIEEIDLHETP--LHVAGKTREI 435


>07_01_0505 -
           3759254-3759490,3759846-3759989,3760135-3760347,
           3760439-3760990,3761339-3761806,3761959-3762023,
           3762133-3762265,3763798-3764022
          Length = 678

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 298 SRAESRHSWTVPHWTDSWTPSSPLG 372
           S+ +SR+  T PH     TP+SPLG
Sbjct: 283 SKGQSRNQNTYPHLMGLQTPTSPLG 307


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,505,649
Number of Sequences: 37544
Number of extensions: 493820
Number of successful extensions: 1156
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)