Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0894
         (800 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47357-6|CAA87426.2|  187|Caenorhabditis elegans Hypothetical pr...   248   4e-66
Z47357-7|CAD90185.1|  191|Caenorhabditis elegans Hypothetical pr...   246   1e-65
Z68217-7|CAA92469.2|  301|Caenorhabditis elegans Hypothetical pr...    32   0.42 
Z50741-4|CAO82050.1|  190|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AF038621-2|AAK71385.1|  329|Caenorhabditis elegans Hypothetical ...    29   5.1  
Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z47357-6|CAA87426.2|  187|Caenorhabditis elegans Hypothetical
           protein ZK1128.8a protein.
          Length = 187

 Score =  248 bits (607), Expect = 4e-66
 Identities = 105/184 (57%), Positives = 150/184 (81%), Gaps = 2/184 (1%)
 Frame = +2

Query: 92  MLVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCTGNLCTKDSYDYLKTLASDVHVVR 271
           MLVL++GD ++PHR +++  KF+KLL+P ++QH+LCTGNLC+++++DYL+TL+SDVH+VR
Sbjct: 1   MLVLLIGDFNLPHRAANISPKFRKLLVPNKMQHVLCTGNLCSRETFDYLRTLSSDVHIVR 60

Query: 272 GDFD-ENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEESLALIQRQLDVDILISGHTHRF 448
           G+FD E   YP+ KVVTVGQFRIG+ HGHQ++PWGD+  L L+ RQLDVDIL++G+T+  
Sbjct: 61  GEFDDETLKYPDTKVVTVGQFRIGVCHGHQIIPWGDQRMLELLARQLDVDILVTGNTYEC 120

Query: 449 EAYEHENKFYINPGSATGGYSPLYRDP-TPSFVLMDIQSSTVVTYVYKLLGDEVKVERIE 625
            A E   +F+++PGSATG +S    +P TPSF L+D+Q+  VVTY+Y+L+ D VKV+RI 
Sbjct: 121 SAVEKNGRFFVDPGSATGSFSVTKTEPTTPSFALLDVQADNVVTYLYRLIDDAVKVDRII 180

Query: 626 YKKT 637
           YKK+
Sbjct: 181 YKKS 184


>Z47357-7|CAD90185.1|  191|Caenorhabditis elegans Hypothetical
           protein ZK1128.8b protein.
          Length = 191

 Score =  246 bits (602), Expect = 1e-65
 Identities = 104/183 (56%), Positives = 149/183 (81%), Gaps = 2/183 (1%)
 Frame = +2

Query: 95  LVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCTGNLCTKDSYDYLKTLASDVHVVRG 274
           LVL++GD ++PHR +++  KF+KLL+P ++QH+LCTGNLC+++++DYL+TL+SDVH+VRG
Sbjct: 6   LVLLIGDFNLPHRAANISPKFRKLLVPNKMQHVLCTGNLCSRETFDYLRTLSSDVHIVRG 65

Query: 275 DFD-ENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEESLALIQRQLDVDILISGHTHRFE 451
           +FD E   YP+ KVVTVGQFRIG+ HGHQ++PWGD+  L L+ RQLDVDIL++G+T+   
Sbjct: 66  EFDDETLKYPDTKVVTVGQFRIGVCHGHQIIPWGDQRMLELLARQLDVDILVTGNTYECS 125

Query: 452 AYEHENKFYINPGSATGGYSPLYRDP-TPSFVLMDIQSSTVVTYVYKLLGDEVKVERIEY 628
           A E   +F+++PGSATG +S    +P TPSF L+D+Q+  VVTY+Y+L+ D VKV+RI Y
Sbjct: 126 AVEKNGRFFVDPGSATGSFSVTKTEPTTPSFALLDVQADNVVTYLYRLIDDAVKVDRIIY 185

Query: 629 KKT 637
           KK+
Sbjct: 186 KKS 188


>Z68217-7|CAA92469.2|  301|Caenorhabditis elegans Hypothetical
           protein F58G6.2 protein.
          Length = 301

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = +3

Query: 438 RIALRLTNTRISSISILVQLLEVTALYTGILLLRLC*WTFRVRQWSPTFTSSSVMKSKLK 617
           R+ +  TNT    +S +  L  +  ++  I+++ LC +TF  +Q    F++SS+ K   +
Sbjct: 149 RLTIEDTNT-FQLLSQICTLFILIVMFISIIIVILC-YTFIQKQMKTRFSASSITKKSQE 206

Query: 618 ELN 626
           +LN
Sbjct: 207 QLN 209


>Z50741-4|CAO82050.1|  190|Caenorhabditis elegans Hypothetical
           protein F55G7.4 protein.
          Length = 190

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = -3

Query: 468 FSCS*ASKRCVCPDIRMSTSSCLCIKARDSSSPQGTTWCP*ISPMRNCPTVTTFCSGYVA 289
           FS + ++   + P IR STSSCL    ++S +     + P I+  RN PT     S   +
Sbjct: 118 FSKTMSTNLHLSPKIRRSTSSCLRSSKKESLNKNLEKYKPDINTERNNPTSGESLSNRKS 177

Query: 288 FSSKSPLT 265
            +SK+  T
Sbjct: 178 KNSKTLFT 185


>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
            C46C2.1b protein.
          Length = 1677

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/76 (19%), Positives = 31/76 (40%)
 Frame = -1

Query: 473  TYSRVRKPQSDACALISGCPHPAASVSKLETLHRPKGLLGVHESVQCGTVQL*RLSALDM 294
            T + ++    +A   +   P P    +K+ T   P  +L    ++   + +   +S    
Sbjct: 1544 TLTALQSALGNASLSLPASPPPNTETTKVNTTVIPSDVLATRMTMSQSSTKSSNVSVSSR 1603

Query: 293  SHSHQNLP*QHAHHWP 246
               +Q+ P +H HH P
Sbjct: 1604 HRDNQSAPPRHHHHQP 1619


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
            C46C2.1a protein.
          Length = 1838

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/76 (19%), Positives = 31/76 (40%)
 Frame = -1

Query: 473  TYSRVRKPQSDACALISGCPHPAASVSKLETLHRPKGLLGVHESVQCGTVQL*RLSALDM 294
            T + ++    +A   +   P P    +K+ T   P  +L    ++   + +   +S    
Sbjct: 1705 TLTALQSALGNASLSLPASPPPNTETTKVNTTVIPSDVLATRMTMSQSSTKSSNVSVSSR 1764

Query: 293  SHSHQNLP*QHAHHWP 246
               +Q+ P +H HH P
Sbjct: 1765 HRDNQSAPPRHHHHQP 1780


>AF038621-2|AAK71385.1|  329|Caenorhabditis elegans Hypothetical
           protein M116.4 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 389 LETLHRPKGLLGVHESVQCGTVQL 318
           LE  HRPK  L +H +++C T+ +
Sbjct: 114 LEIFHRPKVKLSLHNTIRCETMNI 137


>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 540 NEGVGSLYKGL*PPV 496
           NEG+G  YKG+ PP+
Sbjct: 54  NEGIGGFYKGILPPI 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,764,229
Number of Sequences: 27780
Number of extensions: 445536
Number of successful extensions: 1189
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)