Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0894
         (800 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    29   0.050
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.62 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    24   1.9  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.5  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   3.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   3.3  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 29.1 bits (62), Expect = 0.050
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 594 SVMKSKLKELNTRRHDLL-YVPPFSNMSEYYNRSVT 698
           +VM+ KLK+   R +DLL YV P    + ++ R VT
Sbjct: 219 NVMRMKLKQFMPRLYDLLGYVMPDRTFAPFFTRVVT 254


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 146 ASCCICEECEDPRGQVPT-FCMVYLYAYTVKSSCILL*IMNYVVK 15
           AS C C +C++ R  + T F  V        S C+ L  MN V++
Sbjct: 323 ASSCSCLDCDEIRESLDTQFLQVCRSRRHSDSCCLCLDSMNAVIR 367


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 3/18 (16%)
 Frame = +1

Query: 316 HSWTVPHWTD---SWTPS 360
           HSW    WTD   SW PS
Sbjct: 92  HSWMTLMWTDSHLSWKPS 109


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 449 QSDACALISGCPHPAASVSKLETLHRPKGLLGVHESVQCG 330
           +SD   + S    P +  +K+ET H    L  ++  ++CG
Sbjct: 434 KSDMSNMQSDDGGPLSLKNKVETTHSGTSLFRINLGIECG 473


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 239 KTLASDVHVVRGDFDE 286
           +TL S+VH+ + ++DE
Sbjct: 37  ETLQSEVHITKDEYDE 52


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 239 KTLASDVHVVRGDFDE 286
           +TL S+VH+ + ++DE
Sbjct: 37  ETLQSEVHITKDEYDE 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,461
Number of Sequences: 438
Number of extensions: 5362
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)