Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0891
         (751 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   3.1  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   3.1  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   3.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   4.0  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   5.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   7.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   9.3  

>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 507 VCSIELKENYDNKCQEKLYINN 442
           + S+    NY+N   +KLY NN
Sbjct: 82  ISSLSNNYNYNNNNYKKLYCNN 103


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 507 VCSIELKENYDNKCQEKLYINN 442
           + S+    NY+N   +KLY NN
Sbjct: 82  ISSLSNNYNYNNNNYKKLYCNN 103


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 507 VCSIELKENYDNKCQEKLYINN 442
           + S+    NY+N   +KLY NN
Sbjct: 82  ISSLSNNYNYNNNNYKKLYCNN 103


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 246 VEELLAHSPTDITEIYLN 299
           VEE+    P D TE+YL+
Sbjct: 785 VEEIPRRIPMDATEVYLD 802


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = +2

Query: 356 SHQRYSLYNQTFGSNYSSIILHLIY 430
           ++  Y+ YN  + +NY  +  ++ Y
Sbjct: 333 NYNNYNNYNNNYNNNYKKLYYNINY 357



 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 127 YINRF*NYRKHHILKHTNEYVIYLNILYTRRV 222
           Y N + NY  ++   + N   +Y NI Y  ++
Sbjct: 330 YNNNYNNYNNYNNNYNNNYKKLYYNINYIEQI 361


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 450 CITFLGIYCHSF 485
           CI  LGIYC  +
Sbjct: 205 CIVMLGIYCRLY 216


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 575 NVIVK*SVSFHNYTCNLAILLI 640
           NV+ K  V FH+YT ++ I ++
Sbjct: 187 NVLNKQHVHFHDYTGSVVIHVV 208


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,786
Number of Sequences: 438
Number of extensions: 4024
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)