Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0888
         (589 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73971-9|CAH04730.1|  522|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z73971-8|CAA98250.1|  488|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AY532645-1|AAS21318.1|  522|Caenorhabditis elegans egg laying de...    30   1.1  
Z78019-7|CAB01454.2|  547|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U23455-2|AAC46534.1|  423|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U88311-5|AAB42343.1|  531|Caenorhabditis elegans Udp-glucuronosy...    29   3.2  
AC006655-6|AAF39878.2|  383|Caenorhabditis elegans Hypothetical ...    29   3.2  
U97003-1|AAB52270.2|  527|Caenorhabditis elegans Udp-glucuronosy...    28   4.3  
X59156-3|CAA41873.1|   85|Caenorhabditis elegans transposase pro...    27   7.5  
Z75711-10|CAK55176.1|  400|Caenorhabditis elegans Hypothetical p...    27   9.9  
Z75711-9|CAK55175.1|  331|Caenorhabditis elegans Hypothetical pr...    27   9.9  
DQ185512-1|ABA28304.1|  400|Caenorhabditis elegans AXL-1 protein.      27   9.9  

>Z73971-9|CAH04730.1|  522|Caenorhabditis elegans Hypothetical
           protein C50H2.2a protein.
          Length = 522

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 442 VFVVVFELISFNKSHSKLMNTIDTPDI 362
           VFV+V   I F KSH +L+ TID  D+
Sbjct: 196 VFVIVLSAIKF-KSHQRLLKTIDMVDV 221


>Z73971-8|CAA98250.1|  488|Caenorhabditis elegans Hypothetical
           protein C50H2.2b protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 442 VFVVVFELISFNKSHSKLMNTIDTPDI 362
           VFV+V   I F KSH +L+ TID  D+
Sbjct: 162 VFVIVLSAIKF-KSHQRLLKTIDMVDV 187


>AY532645-1|AAS21318.1|  522|Caenorhabditis elegans egg laying
           defective EGL-47A protein.
          Length = 522

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 442 VFVVVFELISFNKSHSKLMNTIDTPDI 362
           VFV+V   I F KSH +L+ TID  D+
Sbjct: 196 VFVIVLSAIKF-KSHQRLLKTIDMVDV 221


>Z78019-7|CAB01454.2|  547|Caenorhabditis elegans Hypothetical
           protein ZK863.3 protein.
          Length = 547

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 172 INDTML*SGCDIQVDMMSTYDILASETGRFGFSMSICTIFGSLQEKVTNYER*RHNLKDF 351
           +ND +L     +++ + STY+ +A +T R     S+C  F     K T Y+   H + D 
Sbjct: 228 LNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFH--MAKDTGYKVVIHMMPDL 285

Query: 352 -HVGLCR 369
            +VGL R
Sbjct: 286 PNVGLER 292


>U23455-2|AAC46534.1|  423|Caenorhabditis elegans Hypothetical
           protein F55E10.5 protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +2

Query: 41  RCC*TEQNVPENFIVFKKLIMYFIILSSITINI 139
           +CC   +NV  +F +  + + Y  ++++IT+N+
Sbjct: 28  KCCKKHKNVDRHFDILSEFLTYKYVVNAITLNL 60


>U88311-5|AAB42343.1|  531|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein25 protein.
          Length = 531

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 204 ITATLQHGIVNSTRSAAFVVKPILMV 127
           +TA + HG + ST   AF+ KP LMV
Sbjct: 368 LTAFMTHGGLGSTNELAFLGKPALMV 393


>AC006655-6|AAF39878.2|  383|Caenorhabditis elegans Hypothetical
           protein H10D18.6 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -2

Query: 204 ITATLQHGIVNSTRSAAFVVKPILM 130
           +TA L HG + ST  AAF+ KP +M
Sbjct: 204 LTAFLTHGGLGSTNEAAFLGKPSIM 228


>U97003-1|AAB52270.2|  527|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein32 protein.
          Length = 527

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -2

Query: 204 ITATLQHGIVNSTRSAAFVVKPILM 130
           +TA L HG + ST  AAF+ KP +M
Sbjct: 368 LTAFLTHGGLGSTNEAAFLGKPSVM 392


>X59156-3|CAA41873.1|   85|Caenorhabditis elegans transposase
           protein.
          Length = 85

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -1

Query: 307 FLEGSRILYIWTSRTR 260
           FL+ +R+L+IWT RTR
Sbjct: 70  FLQRTRLLFIWTFRTR 85


>Z75711-10|CAK55176.1|  400|Caenorhabditis elegans Hypothetical
           protein K02B12.4b protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 244 SETGRFGFSMSICTIFGSLQEKVTNYER*RH 336
           SE  RF F  ++CT   SLQE   + E   H
Sbjct: 171 SEDDRFSFFNAVCTRLNSLQETKNSSETEEH 201


>Z75711-9|CAK55175.1|  331|Caenorhabditis elegans Hypothetical
           protein K02B12.4a protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 244 SETGRFGFSMSICTIFGSLQEKVTNYER*RH 336
           SE  RF F  ++CT   SLQE   + E   H
Sbjct: 102 SEDDRFSFFNAVCTRLNSLQETKNSSETEEH 132


>DQ185512-1|ABA28304.1|  400|Caenorhabditis elegans AXL-1 protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 244 SETGRFGFSMSICTIFGSLQEKVTNYER*RH 336
           SE  RF F  ++CT   SLQE   + E   H
Sbjct: 171 SEDDRFSFFNAVCTRLNSLQETKNSSETEEH 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,617,960
Number of Sequences: 27780
Number of extensions: 294315
Number of successful extensions: 710
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)