Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0888
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   5.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.8  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.0  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 47   C*TEQNVPENFIVFKKLIM 103
            C TEQ+ PE  I  K L+M
Sbjct: 1173 CQTEQDAPEAPIAIKALVM 1191


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = -2

Query: 378 LTHPT*PNMKIFQIMTSSFIICNFFLKAPEYCTYGH 271
           LTH   P      I T   +      K P YC +GH
Sbjct: 574 LTHKGKPIRMRIGIHTGMVLAGVVGKKMPRYCLFGH 609


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 229 KWTSYPLGYHSHFTTW 182
           +WT YP G  ++   W
Sbjct: 27  EWTKYPFGAEANTPGW 42


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 196 HFTTWYR*FDTLCGLRRKTDI 134
           HF TWY+    L G  R++++
Sbjct: 363 HFITWYKDGRQLPGTGRQSEL 383


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 196 HFTTWYR*FDTLCGLRRKTDI 134
           HF TWY+    L G  R++++
Sbjct: 363 HFITWYKDGRQLPGTGRQSEL 383


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 166 TLCGLRRKTDINGD 125
           T C + RKT+++GD
Sbjct: 717 TTCNMFRKTNLSGD 730


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -3

Query: 65  RFVRSNSNEYNTETQSCVHNL 3
           +++R   + Y+T    C+H L
Sbjct: 320 QYIRHIKSPYHTPEPDCIHEL 340


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 256 RFGFSMSICTIFGSLQEKVTNYER 327
           RFG  +S   ++G+L  K     R
Sbjct: 584 RFGVGVSFSAVYGALLTKTNRIAR 607


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 256 RFGFSMSICTIFGSLQEKVTNYER 327
           RFG  +S   ++G+L  K     R
Sbjct: 674 RFGVGVSFSAVYGALLTKTNRIAR 697


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,132
Number of Sequences: 438
Number of extensions: 3917
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)