Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0887
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    27   0.16 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    27   0.16 
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   2.0  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    23   2.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.6  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   6.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.0  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -2

Query: 714 KFVLTIE-YHLVFDLKSIETFLVTFVQH 634
           K +L I+ Y+L FD+  I TFL  F++H
Sbjct: 212 KILLMIQLYYLYFDVIVISTFLQLFLEH 239


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -2

Query: 714 KFVLTIE-YHLVFDLKSIETFLVTFVQH 634
           K +L I+ Y+L FD+  I TFL  F++H
Sbjct: 138 KILLMIQLYYLYFDVIVISTFLQLFLEH 165


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 338 YKINISGCEMKSKYSVL 388
           +K+ +SG + KSKY +L
Sbjct: 6   FKVRVSGLDKKSKYILL 22


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 338 YKINISGCEMKSKYSVL 388
           +K+ +SG + KSKY +L
Sbjct: 6   FKVRVSGLDKKSKYILL 22


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 47  YCCIILIFVDYVF 85
           YC ++L+F+ Y F
Sbjct: 76  YCSVLLVFLTYFF 88


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 47  YCCIILIFVDYVF 85
           YC ++L+F+ Y F
Sbjct: 72  YCSVLLVFLTYFF 84


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 488 IITDGLSMS*RRCSEALRWKLHDLILFVLHHY 393
           I+ D L  +  +CSE  + +   ++ FVL +Y
Sbjct: 76  ILPDALVTNCSKCSEVQKKQAGKILTFVLLNY 107


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +2

Query: 200 NIKLDKV*MIVSIYTPLHYLTSQI*YKMYSYSKCFELKSNNLRSLL 337
           +IKL+K   I   Y    +L   I   +  YSK F     +++ +L
Sbjct: 22  SIKLEKQTFIQKFYAVAFFLALSIGVVVSIYSKSFHRNEIHIKIVL 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,518
Number of Sequences: 336
Number of extensions: 2919
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)