Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0887
         (757 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021578-6|CAI21080.1|  516|Homo sapiens recombining binding pro...    30   7.8  
AL021578-5|CAI21079.1|  517|Homo sapiens recombining binding pro...    30   7.8  
AL021578-4|CAI21078.1|  471|Homo sapiens recombining binding pro...    30   7.8  
AB027710-1|BAA87051.1|  516|Homo sapiens transcription factor RB...    30   7.8  
AB026048-1|BAA86121.1|  520|Homo sapiens RBP-L protein.                30   7.8  
AB024964-1|BAA88232.1|  520|Homo sapiens transcription factor RB...    30   7.8  

>AL021578-6|CAI21080.1|  516|Homo sapiens recombining binding
           protein suppressor of hairless (Drosophila)-like
           protein.
          Length = 516

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 581 QESPC*PIAPKTFYNKSSCWTNV-TKNVSIDFKSN 682
           Q SPC   A +   N SSCWT + T++V   F ++
Sbjct: 340 QASPCPKEANRALLNDSSCWTIIGTESVEFSFSTS 374


>AL021578-5|CAI21079.1|  517|Homo sapiens recombining binding
           protein suppressor of hairless (Drosophila)-like
           protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 581 QESPC*PIAPKTFYNKSSCWTNV-TKNVSIDFKSN 682
           Q SPC   A +   N SSCWT + T++V   F ++
Sbjct: 340 QASPCPKEANRALLNDSSCWTIIGTESVEFSFSTS 374


>AL021578-4|CAI21078.1|  471|Homo sapiens recombining binding
           protein suppressor of hairless (Drosophila)-like
           protein.
          Length = 471

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 581 QESPC*PIAPKTFYNKSSCWTNV-TKNVSIDFKSN 682
           Q SPC   A +   N SSCWT + T++V   F ++
Sbjct: 340 QASPCPKEANRALLNDSSCWTIIGTESVEFSFSTS 374


>AB027710-1|BAA87051.1|  516|Homo sapiens transcription factor RBP-L
           protein.
          Length = 516

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 581 QESPC*PIAPKTFYNKSSCWTNV-TKNVSIDFKSN 682
           Q SPC   A +   N SSCWT + T++V   F ++
Sbjct: 340 QASPCPKEANRALLNDSSCWTIIGTESVEFSFSTS 374


>AB026048-1|BAA86121.1|  520|Homo sapiens RBP-L protein.
          Length = 520

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 581 QESPC*PIAPKTFYNKSSCWTNV-TKNVSIDFKSN 682
           Q SPC   A +   N SSCWT + T++V   F ++
Sbjct: 340 QASPCPKEANRALLNDSSCWTIIGTESVEFSFSTS 374


>AB024964-1|BAA88232.1|  520|Homo sapiens transcription factor RBP-L
           protein.
          Length = 520

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 581 QESPC*PIAPKTFYNKSSCWTNV-TKNVSIDFKSN 682
           Q SPC   A +   N SSCWT + T++V   F ++
Sbjct: 340 QASPCPKEANRALLNDSSCWTIIGTESVEFSFSTS 374


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,107,298
Number of Sequences: 237096
Number of extensions: 1403152
Number of successful extensions: 5711
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5711
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)