Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0884
(740 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 170 4e-41
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 163 5e-39
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 155 1e-36
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 153 4e-36
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 150 3e-35
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 149 5e-35
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 137 3e-31
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 135 9e-31
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 131 2e-29
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 130 3e-29
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 130 5e-29
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 129 8e-29
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 127 3e-28
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 126 8e-28
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 120 4e-26
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 115 1e-24
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 113 3e-24
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 113 3e-24
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 112 8e-24
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|... 112 8e-24
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 110 4e-23
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc... 109 5e-23
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 109 9e-23
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 109 9e-23
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 105 1e-21
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 104 2e-21
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 104 3e-21
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 103 5e-21
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 103 6e-21
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 101 2e-20
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 100 3e-20
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 99 1e-19
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 94 3e-18
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 94 4e-18
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 91 2e-17
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 90 5e-17
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 90 5e-17
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 90 6e-17
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 89 8e-17
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 89 1e-16
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 88 2e-16
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 86 7e-16
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 86 1e-15
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 85 1e-15
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 83 7e-15
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 82 1e-14
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 81 2e-14
UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep: Cytoch... 79 1e-13
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 78 2e-13
UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:... 78 3e-13
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 78 3e-13
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 77 3e-13
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 77 6e-13
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 76 8e-13
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 75 2e-12
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 74 4e-12
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 72 2e-11
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 71 3e-11
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 71 4e-11
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 70 7e-11
UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep... 68 2e-10
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 68 2e-10
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 65 1e-09
UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:... 64 3e-09
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula... 63 6e-09
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 62 1e-08
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 62 2e-08
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ... 56 1e-06
UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum lineare|... 55 2e-06
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis... 55 2e-06
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 54 3e-06
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep... 54 4e-06
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re... 52 2e-05
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 51 3e-05
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo... 50 5e-05
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene... 50 5e-05
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 50 6e-05
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor... 48 2e-04
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon domesti... 46 7e-04
UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole ge... 46 0.001
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc... 46 0.001
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 46 0.001
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 46 0.001
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica... 45 0.002
UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;... 44 0.003
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 44 0.005
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 43 0.007
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 42 0.021
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 41 0.028
UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Re... 41 0.037
UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula ... 40 0.049
UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep: ... 40 0.049
UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Re... 40 0.049
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:... 40 0.064
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 40 0.085
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ... 40 0.085
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ... 39 0.11
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 39 0.15
UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 39 0.15
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:... 38 0.26
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 38 0.34
UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1; Ples... 38 0.34
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu... 38 0.34
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli... 37 0.60
UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4... 37 0.60
UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 37 0.60
UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Re... 37 0.60
UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5; Su... 36 1.0
UniRef50_A6C5Y3 Cluster: Cytochrome b/b6-like protein; n=1; Plan... 36 1.4
UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter violace... 35 2.4
UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 35 2.4
UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus rugul... 34 3.2
UniRef50_Q8Z049 Cluster: Cytochrome b6; n=5; Cyanobacteria|Rep: ... 34 3.2
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla... 34 4.2
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 33 5.6
UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium falcipar... 33 9.7
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 170 bits (413), Expect = 4e-41
Identities = 83/140 (59%), Positives = 91/140 (65%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
FFFICIYLH+GRGIYY S+ L YVLP GQ+SFW ATVITN
Sbjct: 90 FFFICIYLHVGRGIYYGSYKFTPTWLIGVIILFLVMGTAFMGYVLPWGQMSFWVATVITN 149
Query: 434 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNP 613
LL AIPYLG LV + GGFAVDNATLTRF+TFHF HQTGSNNP
Sbjct: 150 LLYAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIVLAMTMIHLLFLHQTGSNNP 209
Query: 614 LGLNRNLDKIPFHPFFTFKD 673
+GLN N+DKIPFHP+FTFKD
Sbjct: 210 IGLNSNIDKIPFHPYFTFKD 229
Score = 106 bits (254), Expect = 7e-22
Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
R +HP+FKI NN LCLIIQI+TGLFL ++YTA+I +AFY
Sbjct: 6 RNSHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFY 65
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
VN+ICR+VNYG ++RTLHANGASFFF YLH+
Sbjct: 66 SVNHICRDVNYGWLLRTLHANGASFFFICIYLHV 99
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 163 bits (395), Expect = 5e-39
Identities = 80/162 (49%), Positives = 95/162 (58%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
FFFIC+Y+HIGRGI+Y S+ + + YVLP GQ+SFWGATVITN
Sbjct: 6 FFFICLYIHIGRGIFYGSYMTFHAWMIGVVILFMVMAAAFLGYVLPWGQMSFWGATVITN 65
Query: 434 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNP 613
L SAIP++GT LV I GGF+V NATLTRF+TFHF HQ G+NNP
Sbjct: 66 LFSAIPFIGTDLVQWIWGGFSVGNATLTRFFTFHFILPFIVLAASLVHILFLHQAGANNP 125
Query: 614 LGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLL 739
LG++ DKIPFHP+FTFKD NPYLL
Sbjct: 126 LGISSQSDKIPFHPYFTFKDIVGFVVMLSALIILTLLNPYLL 167
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 155 bits (376), Expect = 1e-36
Identities = 73/140 (52%), Positives = 90/140 (64%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
FFFI +Y+HI RG+Y+ SF LK + YVLP GQ+SFWGATVITN
Sbjct: 86 FFFIFLYIHIARGLYFSSFILKGPWMSGVTIIFTLMATAFLGYVLPWGQMSFWGATVITN 145
Query: 434 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNP 613
LLSAIPY+GT + I GGF+VDN TLTRF+T HF H+TGS+NP
Sbjct: 146 LLSAIPYIGTSITQWIWGGFSVDNPTLTRFFTLHFMLPFILTVLIIIHIFSLHETGSSNP 205
Query: 614 LGLNRNLDKIPFHPFFTFKD 673
LG++ N+DKIPFHP++T KD
Sbjct: 206 LGISNNIDKIPFHPYYTLKD 225
Score = 63.7 bits (148), Expect = 5e-09
Identities = 29/59 (49%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
CL IQI TG+FL ++++++I +AF +++I R+VN G +IR HAN ASFFF Y+H+
Sbjct: 37 CLAIQISTGIFLAMHFSSDISLAFSSISHIMRDVNMGWMIRMAHANTASFFFIFLYIHI 95
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 153 bits (371), Expect = 4e-36
Identities = 73/139 (52%), Positives = 86/139 (61%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FFIC+++HIGRG+YY S+ YVLP GQ+SFWGATVITNL
Sbjct: 90 FFICLFMHIGRGLYYGSYTFLETWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITNL 149
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
LSAIPY+GT LV I GGF+VD ATLTRF+ FHF H+TGSNNP
Sbjct: 150 LSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNPT 209
Query: 617 GLNRNLDKIPFHPFFTFKD 673
G+ N DKIPFHP++T KD
Sbjct: 210 GIPSNTDKIPFHPYYTIKD 228
Score = 91.5 bits (217), Expect = 2e-17
Identities = 46/99 (46%), Positives = 60/99 (60%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RKTHP+ KI+NN +CLI+QI+TGLFL ++YT++ AF
Sbjct: 5 RKTHPLMKIVNNTFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFFYLHLFTYRTRNL 297
V +ICR+VNYG IIR +HANGAS FF + LF + R L
Sbjct: 65 SVTHICRDVNYGWIIRYMHANGASMFF-ICLFMHIGRGL 102
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 150 bits (364), Expect = 3e-35
Identities = 73/139 (52%), Positives = 87/139 (62%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FFIC++LHIGRG+YY SF YVLP GQ+SFWGATVITNL
Sbjct: 90 FFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNL 149
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
LSAIPY+GT LV I GG++VD+ TLTRF+TFHF H+TGSNNPL
Sbjct: 150 LSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTFHFILPFIIAALATLHLLFLHETGSNNPL 209
Query: 617 GLNRNLDKIPFHPFFTFKD 673
G+ + DKI FHP++T KD
Sbjct: 210 GITSHSDKITFHPYYTIKD 228
Score = 74.9 bits (176), Expect = 2e-12
Identities = 41/99 (41%), Positives = 55/99 (55%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RK +P+ K+IN+ CLI+QI TGLFL ++Y+ + AF
Sbjct: 5 RKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFFYLHLFTYRTRNL 297
+ +I R+VNYG IIR LHANGAS FF + LF + R L
Sbjct: 65 SIAHITRDVNYGWIIRYLHANGASMFF-ICLFLHIGRGL 102
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 149 bits (362), Expect = 5e-35
Identities = 72/139 (51%), Positives = 86/139 (61%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FFIC++LH+GRG+YY S+ YVLP GQ+SFWGATVITNL
Sbjct: 90 FFICLFLHVGRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNL 149
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
LSAIPY+G+ LV I GGF+VD ATLTRF+ FHF H+TGSNNP
Sbjct: 150 LSAIPYIGSDLVQWIWGGFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGSNNPS 209
Query: 617 GLNRNLDKIPFHPFFTFKD 673
GL + DKIPFHP++T KD
Sbjct: 210 GLPSDADKIPFHPYYTIKD 228
Score = 90.2 bits (214), Expect = 5e-17
Identities = 47/99 (47%), Positives = 60/99 (60%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RKTHP+ KIIN+ +CLIIQI+TGLFL ++YT++ AF
Sbjct: 5 RKTHPLMKIINSSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFFYLHLFTYRTRNL 297
V +ICR+VNYG +IR LHANGAS FF + LF + R L
Sbjct: 65 SVTHICRDVNYGWLIRYLHANGASMFF-ICLFLHVGRGL 102
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 137 bits (331), Expect = 3e-31
Identities = 66/139 (47%), Positives = 82/139 (58%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FFICIY+HI RG+YY + K V L YVLP GQ+SFW ATVITNL
Sbjct: 82 FFICIYIHIARGLYYGLYLNKNVWLSGVTLLMTLMATAFFGYVLPWGQMSFWAATVITNL 141
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
L+AIPYLG + + GGF++++ TLTRF HF H GSNNPL
Sbjct: 142 LTAIPYLGVAVTTWLWGGFSINDPTLTRFCALHFILPFIIISLSSIHIILLHNEGSNNPL 201
Query: 617 GLNRNLDKIPFHPFFTFKD 673
G N ++DKIPFHP+ ++KD
Sbjct: 202 GTNSDIDKIPFHPYHSYKD 220
Score = 62.9 bits (146), Expect = 8e-09
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
CL++Q++TG FL I+YTANI +AF V +I R+V G I++ HA GAS FF Y+H+
Sbjct: 32 CLMLQVLTGFFLAIHYTANINLAFSSVVHITRDVPCGWIMQNTHAIGASLFFICIYIHI 90
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 135 bits (327), Expect = 9e-31
Identities = 60/98 (61%), Positives = 74/98 (75%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXX 559
YVLP GQ+SFWGATVITNL+SA+PY+GT++V + GGFAVDNATLTRF++FHF
Sbjct: 133 YVLPWGQMSFWGATVITNLVSAVPYMGTMIVQWLWGGFAVDNATLTRFFSFHFILPFIIA 192
Query: 560 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
HQTGSNNP G+++NLDK+ FHPFF+ KD
Sbjct: 193 AMVILHLLFLHQTGSNNPAGMSKNLDKVSFHPFFSVKD 230
Score = 35.1 bits (77), Expect = 1.8
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 51 T*PI*YFFLMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSN 230
T PI + +K+RI S M + N+ IIF+N L Y N S L+ K + ++ +
Sbjct: 24 TIPIKFILHVKFRILISIMFSYPNHNSIIFSNTLFRSYYNCLWYSNLHFTKRQHSMSYTC 83
Query: 231 ITC 239
ITC
Sbjct: 84 ITC 86
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 131 bits (317), Expect = 2e-29
Identities = 62/139 (44%), Positives = 82/139 (58%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FF+ IYLHIGRG+YY SF++K L YVLP GQ+SFWGATVITNL
Sbjct: 101 FFMLIYLHIGRGVYYHSFHMKKTWLVGCIIFTMLMVTAFTGYVLPWGQMSFWGATVITNL 160
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
A+PY+G+ L+ + GG V +ATL RF+ HF H+TGS+NPL
Sbjct: 161 FGAVPYVGSTLMEWVWGGHCVGDATLKRFFVLHFVSPFIIAALVALHLFFLHETGSSNPL 220
Query: 617 GLNRNLDKIPFHPFFTFKD 673
G++ + D +PFH ++ KD
Sbjct: 221 GVDSSGDLVPFHNYYLLKD 239
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+CL+ QIITGL + ++YT + +AF V +I R+VN G +R LHANGAS FF YLH+
Sbjct: 50 MCLVSQIITGLLMAVHYTPEVNLAFSSVVHIMRDVNGGWFVRNLHANGASAFFMLIYLHI 109
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 130 bits (315), Expect = 3e-29
Identities = 67/142 (47%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGATVI 427
FFFI +YLHIGR +YY S+ L YVLP GQ+SFWGATVI
Sbjct: 88 FFFIWVYLHIGRNLYYGSYRSPRGLLWSIGVVIFILMMATAFIGYVLPWGQMSFWGATVI 147
Query: 428 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSN 607
TNLLSAIP++GT V + GGF+VDNATL RF++ H+ HQ GSN
Sbjct: 148 TNLLSAIPWIGTDFVLFVWGGFSVDNATLNRFFSLHYLLPFILAALVVMHLLALHQDGSN 207
Query: 608 NPLGLNRNLDKIPFHPFFTFKD 673
NP G++ + D++ FHP+FT KD
Sbjct: 208 NPEGISSSSDRLRFHPYFTSKD 229
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +1
Query: 4 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 183
K +PI ++N+ + L+I II+GL L ++YT N +AF
Sbjct: 5 KRNPILVLVNDFVIDSPLPTNLTYFWNFGSLLGVNLVILIISGLTLAMHYTPNTLLAFSS 64
Query: 184 VNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
V +I R+VN G ++R +HANGASFFF YLH+
Sbjct: 65 VEHIMRDVNNGWLLRYIHANGASFFFIWVYLHI 97
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 130 bits (313), Expect = 5e-29
Identities = 60/98 (61%), Positives = 70/98 (71%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXX 559
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+ FHF
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLVQWIWGGFSVDNATLTRFFAFHFLFPFVIA 191
Query: 560 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
H+TGSNNP GLN + DKI FHP+F++KD
Sbjct: 192 GATVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKD 229
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 129 bits (311), Expect = 8e-29
Identities = 63/139 (45%), Positives = 81/139 (58%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FF C+Y HIGRG+YY + + V L YVLP GQ+SFWGATVITNL
Sbjct: 94 FFFCMYAHIGRGLYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPWGQMSFWGATVITNL 153
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
L+AIP +G+ LV + GGF+V TLTRFY+ HF H GS+NPL
Sbjct: 154 LTAIPMVGSPLVKWVWGGFSVSGVTLTRFYSLHFILPFVLSMLVLGHVILLHDKGSSNPL 213
Query: 617 GLNRNLDKIPFHPFFTFKD 673
G++ + KI FHP+++ KD
Sbjct: 214 GISSDTGKIRFHPYYSTKD 232
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/54 (55%), Positives = 44/54 (81%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFY 264
LCLI+Q+I+GLFL+ +Y+A+ AF V +I RNVN+G ++R++HANGAS FF+
Sbjct: 43 LCLIMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFFF 96
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 127 bits (306), Expect = 3e-28
Identities = 64/141 (45%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
FFI +YLHI RG+YY S++ ++V YVLP GQ+SFWGATVIT
Sbjct: 95 FFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVIT 154
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNN 610
+L SAIP +G +V + GGF+VDNATL RF++ H+ HQ GSNN
Sbjct: 155 SLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHYLLPFILVGASLLHLAALHQYGSNN 214
Query: 611 PLGLNRNLDKIPFHPFFTFKD 673
PLG++ +DKI F+P+F KD
Sbjct: 215 PLGVHSEMDKIAFYPYFYVKD 235
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/61 (50%), Positives = 47/61 (77%), Gaps = 3/61 (4%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+CL+IQI+TG+FL ++YT ++++AF V +I R+V G ++R +HANGAS FF YLH+
Sbjct: 44 ICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHI 103
Query: 274 F 276
F
Sbjct: 104 F 104
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 126 bits (303), Expect = 8e-28
Identities = 65/152 (42%), Positives = 81/152 (53%), Gaps = 5/152 (3%)
Frame = +2
Query: 233 YMLMELH-----FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*G 397
+ML +H FFICIY HI RG+YY S+ K V Y LP G
Sbjct: 92 WMLRNIHANGSSMFFICIYAHIARGLYYGSYLDKTVWYFGVHLFLLTMAEAFLGYTLPWG 151
Query: 398 QISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXX 577
Q+S+WGATVITN+LS P +G ++ + GG+ V NATL RFYT HF
Sbjct: 152 QMSYWGATVITNMLSVSPVVGESMLRYVWGGWTVCNATLKRFYTLHFLLPFVMVAVVFLH 211
Query: 578 XXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
H+ GSNNPLG+ +PFHPF+T KD
Sbjct: 212 LFFLHEKGSNNPLGIESGTMCVPFHPFYTIKD 243
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
R T+ + KI+N+ LCL+IQ+++GL L+ +YTA+ ++AF
Sbjct: 20 RSTNKLVKIMNDSFYDLPCPVNLNAWWSFGSMLGLCLVIQLLSGLLLSAHYTAHEDMAFD 79
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
V +I RNV G ++R +HANG+S FF Y H+
Sbjct: 80 SVVHIMRNVEKGWMLRNIHANGSSMFFICIYAHI 113
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 120 bits (289), Expect = 4e-26
Identities = 58/95 (61%), Positives = 65/95 (68%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
FFFICIYLHIGRG+YY S+ K YVLP GQ+SFWGATVITN
Sbjct: 85 FFFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITN 144
Query: 434 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHF 538
LLSA+PY+G LV I GGF+VDNATLTRF+ FHF
Sbjct: 145 LLSAVPYMGNALVQWIWGGFSVDNATLTRFFAFHF 179
Score = 120 bits (289), Expect = 4e-26
Identities = 58/95 (61%), Positives = 65/95 (68%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
FFFICIYLHIGRG+YY S+ K YVLP GQ+SFWGATVITN
Sbjct: 272 FFFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITN 331
Query: 434 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHF 538
LLSA+PY+G LV I GGF+VDNATLTRF+ FHF
Sbjct: 332 LLSAVPYMGNALVQWIWGGFSVDNATLTRFFAFHF 366
Score = 97.1 bits (231), Expect = 4e-19
Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RKTHP+FKI+N+ LCL +QI+TGLFL ++YT++I AF
Sbjct: 1 RKTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFS 60
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
V +ICR+VNYG IIR LHANGASFFF YLH+
Sbjct: 61 SVVHICRDVNYGWIIRNLHANGASFFFICIYLHI 94
Score = 97.1 bits (231), Expect = 4e-19
Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RKTHP+FKI+N+ LCL +QI+TGLFL ++YT++I AF
Sbjct: 188 RKTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFS 247
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
V +ICR+VNYG IIR LHANGASFFF YLH+
Sbjct: 248 SVVHICRDVNYGWIIRNLHANGASFFFICIYLHI 281
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 115 bits (277), Expect = 1e-24
Identities = 55/139 (39%), Positives = 73/139 (52%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FF+C+YLHI R IY+ ++ K YVLP GQ+SFW ATVITNL
Sbjct: 97 FFLCVYLHISRNIYHNTWKNKTTWTLGITIYLLMIITAFMGYVLPWGQMSFWAATVITNL 156
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
SAIPY+G +V I G F++ NATL RFY+ H+ + +NP
Sbjct: 157 FSAIPYIGNTIVLWIWGSFSISNATLNRFYSLHYLLPFILTTLIGMHILALQEENHSNPT 216
Query: 617 GLNRNLDKIPFHPFFTFKD 673
G +D +PFH ++T KD
Sbjct: 217 GTQSEVDSLPFHQYYTTKD 235
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
LCLIIQ+ITG+ L ++Y I +F + + RNV++G I R LHANGAS FF YLH+
Sbjct: 46 LCLIIQLITGILLAMHYCPEINNSFNTIAHTIRNVSWGHITRNLHANGASIFFLCVYLHI 105
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 113 bits (273), Expect = 3e-24
Identities = 55/94 (58%), Positives = 62/94 (65%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FF CIYLHIGRG+YY S LK YVLP GQ+SFWGATVITNL
Sbjct: 47 FFFCIYLHIGRGLYYGSHTLKKTWYTGTMLLLMLMATAFLGYVLPWGQMSFWGATVITNL 106
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHF 538
SA+PY+G LV+ GGFA+DNATLTRF+T HF
Sbjct: 107 SSALPYIGPTLVHWTWGGFAIDNATLTRFFTLHF 140
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Frame = +1
Query: 118 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
QIITG+FL ++YT +I +AF V +ICR+V YG ++R LH NGAS FF YLH+
Sbjct: 1 QIITGIFLAMHYTPHISLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFCIYLHI 55
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 113 bits (273), Expect = 3e-24
Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
FFI +Y+H+ RG+YY S+ + + YVLP GQ+SFWGATVIT
Sbjct: 101 FFIVVYVHMFRGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVIT 160
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNN 610
NL SAIP +G +V + GGF+VDN TL RF++ H+ H SNN
Sbjct: 161 NLFSAIPVVGDDIVTLLWGGFSVDNPTLNRFFSLHYLFPMLLFAVVFLHMWALHVKKSNN 220
Query: 611 PLGLNRN--LDKIPFHPFFTFKD 673
PLG++ D IPFHP++T KD
Sbjct: 221 PLGIDAKGPFDTIPFHPYYTVKD 243
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+ +II I TG+FL + YTA+++ AF V I R+VNYG ++R +HANGAS FF Y+H+
Sbjct: 50 IAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMFFIVVYVHM 109
Query: 274 F 276
F
Sbjct: 110 F 110
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 112 bits (270), Expect = 8e-24
Identities = 54/95 (56%), Positives = 63/95 (66%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
FFFIC+Y+HI RG+YY S+ K YVLP GQ+SFWGATVITN
Sbjct: 89 FFFICLYMHIARGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITN 148
Query: 434 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHF 538
LLSA+PY+G LV I GGF+VD ATLTRF+ FHF
Sbjct: 149 LLSAVPYMGDTLVQWIWGGFSVDXATLTRFFAFHF 183
Score = 92.7 bits (220), Expect = 9e-18
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RKTHP+ KI N LCLI QI+TGLFL ++YT++I AF
Sbjct: 5 RKTHPLMKIANATLVDLPTPSNISALWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
V +ICR+VNYG +IR+LHANGASFFF Y+H+
Sbjct: 65 SVTHICRDVNYGWLIRSLHANGASFFFICLYMHI 98
>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
402|Rep: Cytochrome b - Sycoscapter sp. 402
Length = 157
Score = 112 bits (270), Expect = 8e-24
Identities = 54/117 (46%), Positives = 71/117 (60%)
Frame = +2
Query: 389 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXX 568
P GQ+SFWGATVITNL+SAI Y+G +V + GGF+V +ATL RFYTFHF
Sbjct: 2 PWGQMSFWGATVITNLVSAISYVGESVVLWMWGGFSVSDATLNRFYTFHFISDFVILFLV 61
Query: 569 XXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLL 739
HQTGS NP+GLN N++KIPF+P+++ +D +PY+L
Sbjct: 62 LIHLVFLHQTGSTNPMGLNSNMNKIPFNPYYSIQDLLGFIILIISFILICFLSPYIL 118
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 110 bits (264), Expect = 4e-23
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Frame = +2
Query: 233 YMLMELH-----FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP 391
Y+L LH FFF+ +++H+ +G+YY S+ V L Y
Sbjct: 76 YILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCV 135
Query: 392 *GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXX 571
GQ+S WGATVITNL SAIP++G +V+ + GGF+V N T+ RF+ H+
Sbjct: 136 YGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVI 195
Query: 572 XXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
H GS+NPLG+ NLD+IP H +F FKD
Sbjct: 196 MHLMALHIHGSSNPLGITGNLDRIPMHSYFIFKD 229
Score = 76.2 bits (179), Expect = 8e-13
Identities = 34/65 (52%), Positives = 51/65 (78%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTY 282
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF + +F +
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMV-MFMH 96
Query: 283 RTRNL 297
+ L
Sbjct: 97 MAKGL 101
>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
Cytochrome b - Procladius villosimanus
Length = 233
Score = 109 bits (263), Expect = 5e-23
Identities = 52/84 (61%), Positives = 58/84 (69%)
Frame = +2
Query: 422 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTG 601
VITNLLSAIPYLG L + GGFAVDNATLTRF+ FHF HQTG
Sbjct: 1 VITNLLSAIPYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALTTIHLLFLHQTG 60
Query: 602 SNNPLGLNRNLDKIPFHPFFTFKD 673
S NPLG+N N+DKIPFHP+FT+KD
Sbjct: 61 SPNPLGINSNVDKIPFHPYFTYKD 84
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 109 bits (261), Expect = 9e-23
Identities = 59/141 (41%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FF +Y+HIGRGIYY + V YVLP GQ+S+W + VIT+L
Sbjct: 88 FFFFMYIHIGRGIYYGCYRQAGVWYTGIILMLLLMATSFLGYVLPWGQMSYWASVVITSL 147
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
LS IPY+G LV I GGF+V ATLTRFY+ HF H+TGS+NPL
Sbjct: 148 LSTIPYIGPSLVEWIWGGFSVGQATLTRFYSLHFILPFVMVIVVIIHVGLLHETGSSNPL 207
Query: 617 GL--NRNLDKIPFHPFFTFKD 673
GL + FHP ++ D
Sbjct: 208 GLYDPSGVCMRSFHPLYSCND 228
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFFYLHL 273
L L+ QII+G FL+ +Y A+++ AF + +I R+VNYG +IR H NGAS FFF++++
Sbjct: 37 LMLVCQIISGFFLSTHYVAHVDYAFDSIVHINRDVNYGALIRGFHINGASMFFFFMYI 94
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 109 bits (261), Expect = 9e-23
Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Frame = +2
Query: 224 FEHYMLMELHFFFICIYLHIGRGIYYESFNL-KYV*LXXXXXXXXXXXXXXXXYVLP*GQ 400
F H + + FF I YLH+ +G+ + SF++ K + YVLP GQ
Sbjct: 75 FIHLNVSSIIFFLI--YLHMTKGLIFSSFSMMKITWISGWIMMMLSMLSAFMGYVLPWGQ 132
Query: 401 ISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXX 580
+S WGATVITNLLSAIP +G ++V I GG+ V N T+ F++FHF
Sbjct: 133 MSLWGATVITNLLSAIPVIGKMMVEWIWGGYFVSNFTMKMFFSFHFLVPFIILIFIMIHL 192
Query: 581 XXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
H GSNNP+G N +L KI F+P ++FKD
Sbjct: 193 IILHYYGSNNPIG-NFSLMKIEFNPIYSFKD 222
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +1
Query: 100 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFT 279
+L + IQIITGLFLT YY N E F + I YG ++ +H N +S F+L ++
Sbjct: 33 SLIMSIQIITGLFLTFYY-ENSENCFDSIYIIHIETFYGVLVHFIHLNVSSIIFFL-IYL 90
Query: 280 YRTRNLL 300
+ T+ L+
Sbjct: 91 HMTKGLI 97
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 105 bits (252), Expect = 1e-21
Identities = 53/141 (37%), Positives = 75/141 (53%)
Frame = +2
Query: 251 HFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
+F CIY+HIGRG+YY SF L V YVLP GQ+++W A VI+
Sbjct: 89 NFMLGCIYVHIGRGLYYGSFRLYKVWASGIILLVLVMLAAFTGYVLPWGQMAYWAAQVIS 148
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNN 610
++++AIP +G + + GG+AV N TL R ++ HF H +GS N
Sbjct: 149 SMVTAIPKVGGEVAMWVWGGYAVGNITLKRLFSVHFLLPFVILAVVLLHLLFLHSSGSGN 208
Query: 611 PLGLNRNLDKIPFHPFFTFKD 673
PLGL+ + + FH FF+ KD
Sbjct: 209 PLGLDSDCSLVRFHSFFSVKD 229
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF---FYLHL 273
CL+ QI+TG FL+ YYTA+ ++AF V++I + V+ G +R+ H N A+F Y+H+
Sbjct: 41 CLVSQILTGWFLSFYYTAHEDLAFSSVSFIMKEVSMGWAMRSFHINVANFMLGCIYVHI 99
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 104 bits (250), Expect = 2e-21
Identities = 54/141 (38%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
FF+ ++LH+ R +YY S + + + + YVLP GQ+SFWGATVIT
Sbjct: 89 FFVAVFLHLFRNLYYNSGSQPRELLYISGVVILLLMVITAFIGYVLPWGQMSFWGATVIT 148
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNN 610
+L+SA+P +GT LV + GGF+V N TL RF++FH+ H GS N
Sbjct: 149 SLVSAVPIVGTDLVYYLWGGFSVSNPTLNRFFSFHYLLPFVLAGLSIAHLAALHSYGSTN 208
Query: 611 PLGLNRNLDKIPFHPFFTFKD 673
PL +N ++ K+PF ++ KD
Sbjct: 209 PLSIN-SVAKVPFGSYYIIKD 228
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
L L QI+TG+ L ++Y + +AFY V ++ +V YG +IR H NGAS FF +LHL
Sbjct: 38 LLLASQIVTGILLAMHYCPDTSLAFYSVIHLTVDVPYGFVIRYFHMNGASLFFVAVFLHL 97
Query: 274 F 276
F
Sbjct: 98 F 98
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 104 bits (249), Expect = 3e-21
Identities = 58/161 (36%), Positives = 76/161 (47%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
F +YLHI RG+ Y SF V YVLP G +S+WG TV+TN+
Sbjct: 86 FMFIMYLHILRGLIYGSFCKVDVWYSGILLLFICMGSAFLGYVLPWGSMSYWGMTVVTNM 145
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
LSAIP +G LV I GG + +TL RF++FH+ H+ GS+NPL
Sbjct: 146 LSAIPMVGVYLVETIWGGSSAGVSTLVRFFSFHYLLSLFIMVFILIHLILLHECGSSNPL 205
Query: 617 GLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLL 739
G+ + +K FHP F+ KD PYLL
Sbjct: 206 GVYYSCEKFTFHPLFSLKDTLVFVLVVFLYWFCIFVCPYLL 246
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 103 bits (247), Expect = 5e-21
Identities = 55/143 (38%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
FF +Y+H+ RG+YY S+ + + + YVLP GQ+SFWGATVIT
Sbjct: 103 FFFAVYVHMLRGLYYGSYKEPREVLWILGVIIYLLMMATGFMGYVLPWGQMSFWGATVIT 162
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNN 610
NL SAIPY G +V + GG++V N TL RF++ H+ H G NN
Sbjct: 163 NLFSAIPYFGESIVTLLWGGYSVGNPTLNRFFSLHYLLPFLIAGVVVLHVWALHVAGQNN 222
Query: 611 PLGLNRNLDK--IPFHPFFTFKD 673
P G+ +K +PF P T KD
Sbjct: 223 PEGVEPKSEKDTVPFTPHATIKD 245
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/61 (42%), Positives = 42/61 (68%)
Frame = +1
Query: 115 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTYRTRN 294
+QI+TG+ L ++YT + ++AF V I R+VNYG ++R +HA GAS FF+ ++ + R
Sbjct: 56 MQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFA-VYVHMLRG 114
Query: 295 L 297
L
Sbjct: 115 L 115
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 103 bits (246), Expect = 6e-21
Identities = 62/162 (38%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Frame = +2
Query: 233 YMLMELH-----FFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP 391
+ML LH FFI +YLHI RG+YY S+ + + YVLP
Sbjct: 91 FMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLP 150
Query: 392 *GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXX 571
GQ+SFWGATVIT L AIP +G + + GG AVDNATL RF++ H+
Sbjct: 151 WGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVA 210
Query: 572 XXXXXXHQTGSNNPLGL--------NRNLDKIPFHPFFTFKD 673
H TG+NNP G+ D +PF P+F KD
Sbjct: 211 IHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKD 252
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/62 (53%), Positives = 47/62 (75%), Gaps = 3/62 (4%)
Frame = +1
Query: 100 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLH 270
A CL++QI+TG+ L ++YT ++++AF V +I RNVN G ++R LHANGAS FF YLH
Sbjct: 52 AFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLH 111
Query: 271 LF 276
+F
Sbjct: 112 IF 113
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 101 bits (241), Expect = 2e-20
Identities = 60/162 (37%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Frame = +2
Query: 233 YMLMELH-----FFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP 391
YML LH FF+ +Y+HI RG+YY S+ + + YVLP
Sbjct: 91 YMLRYLHANGASLFFLAVYIHIFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLP 150
Query: 392 *GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXX 571
GQ+SFWGATVIT L AIP +G + + GG AVDN TL RF++ H+
Sbjct: 151 WGQMSFWGATVITGLFGAIPGVGEAIQTWLLGGPAVDNPTLNRFFSLHYLLPFVIAALVV 210
Query: 572 XXXXXXHQTGSNNPLGL--------NRNLDKIPFHPFFTFKD 673
H TG+NNP G+ D +PF P+F KD
Sbjct: 211 VHIWAFHTTGNNNPTGVEVRRGSKEEAKKDTLPFWPYFVIKD 252
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/62 (50%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Frame = +1
Query: 100 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLH 270
A CL++QI TG+ L ++YT ++++AF V +I R+VN G ++R LHANGAS FF Y+H
Sbjct: 52 AFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIH 111
Query: 271 LF 276
+F
Sbjct: 112 IF 113
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 100 bits (240), Expect = 3e-20
Identities = 52/140 (37%), Positives = 72/140 (51%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
F F+ +Y H+ +G+ Y SF L L YV+P G +SFW ATVIT+
Sbjct: 86 FIFMTMYAHMFKGLMYSSFMLPGSWLTGNLILFLMILVAFMGYVIPWGNMSFWAATVITS 145
Query: 434 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNP 613
+SAIP LG ++ I GG+++ TL F+T H+ H GS+NP
Sbjct: 146 FMSAIPILGESILYWIWGGYSITGRTLQFFFTLHYLLPFVISAIAMIHLLLLHSKGSSNP 205
Query: 614 LGLNRNLDKIPFHPFFTFKD 673
LG + ++ K FHPFFT KD
Sbjct: 206 LGTHSHMLKTKFHPFFTNKD 225
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+ + IQI+TGL L +Y++ + AF + + R V +G ++R +H NGASF F Y H+
Sbjct: 36 MLMSIQIMTGLLLVMYFSTSESEAFNSIITLMREVKFGFLLRFMHLNGASFIFMTMYAHM 95
Query: 274 F 276
F
Sbjct: 96 F 96
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 98.7 bits (235), Expect = 1e-19
Identities = 51/139 (36%), Positives = 72/139 (51%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FF +Y H+GRG+YY S+ YVLP GQ+SFWGATVI+N
Sbjct: 92 FFFFMYCHVGRGLYYGSYKNFKAWSMGVAILALSMLEGFMGYVLPAGQMSFWGATVISNF 151
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
L+ IP+ G L+ + GG++V + TL+RF+ HF H+ G++NPL
Sbjct: 152 LTVIPFFGDTLLKYVLGGYSVCDLTLSRFFVAHFLAPFLISLMVLFHLIWGHEKGASNPL 211
Query: 617 GLNRNLDKIPFHPFFTFKD 673
G++ D I P + FKD
Sbjct: 212 GVS-TTDWITLSPGYVFKD 229
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYT-ANIEIAFYRVNYICRNVNYG*IIRTLHANGA-SFFFYLH 270
L +QI++G+ L++YY +E AF + +I R+VN G I+R++H GA SFFF+++
Sbjct: 42 LFVQILSGMLLSLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSFFFFMY 97
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 94.3 bits (224), Expect = 3e-18
Identities = 54/140 (38%), Positives = 67/140 (47%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
FFF +YLHIGRG+Y + L V + YV P GQI GATVIT+
Sbjct: 94 FFFFWVYLHIGRGLYLSKYKLNPVWMKGVLIFFFLMGTAFMGYVPPWGQIFLGGATVITS 153
Query: 434 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNP 613
LLSAIPY+G LV + GGF V TL RF++ H+ NP
Sbjct: 154 LLSAIPYMGGFLVKWVWGGFFVKGPTLHRFFSLHYLLPLILSVFVFFQVFFFQSKSGVNP 213
Query: 614 LGLNRNLDKIPFHPFFTFKD 673
+G + N K F P+F F D
Sbjct: 214 MGGSLNSKKGFFVPYFFFVD 233
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+CL+IQ+++G+FL+ +Y+ IE AF V I +V +G + R++HANGASFFF YLH+
Sbjct: 44 VCLMIQLVSGIFLSFHYSPTIEEAFSSVVMIVDDVPFGWMFRSIHANGASFFFFWVYLHI 103
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 93.9 bits (223), Expect = 4e-18
Identities = 47/93 (50%), Positives = 57/93 (61%)
Frame = +2
Query: 395 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXX 574
GQ+ FWGATVITN LS IPY G +VN I GGF+V + TLTRFYTFHF
Sbjct: 5 GQMGFWGATVITNFLSVIPYYGGDIVNWIWGGFSVGSPTLTRFYTFHFLFPFLIIVFSLV 64
Query: 575 XXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
H+TGS+NPL L+ + K+ F P+ KD
Sbjct: 65 HLVFLHRTGSSNPLKLSSSSLKMSFWPYSGVKD 97
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLK--YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
FF Y H+ RG++Y ++ LK +V YVLP G +S+WG TVIT
Sbjct: 91 FFALTYAHVARGVFYGAY-LKNPHVWYSGLSLYILSMGVGFLGYVLPWGVMSYWGLTVIT 149
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNN 610
N+++ +P G ++ GGF + + TL R + HF HQ GS+N
Sbjct: 150 NMMTVVPG-GARALDWFQGGFVISSLTLKRVFVLHFILPFVILGLALVHVLILHQNGSSN 208
Query: 611 PLGLNRNLDKIPFHPFFTFKD 673
PLGL++ +PFHP+++ KD
Sbjct: 209 PLGLDQEGINVPFHPYYSIKD 229
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYL 267
L L QI++GL LT+ YTA+ +A ++Y+ R+ NYG IIR+LH GAS FF L
Sbjct: 40 LILGSQILSGLILTMNYTADESLAVVSIDYMMRDANYGWIIRSLHMGGASLFFAL 94
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 90.2 bits (214), Expect = 5e-17
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RK+HP+ KI N+ LCLI QI+TGLFL ++YT++I AF
Sbjct: 5 RKSHPLLKIANDALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDISTAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
V +ICR+VNYG +IR +HANGASFFF Y H+
Sbjct: 65 SVTHICRDVNYGWLIRNMHANGASFFFICIYFHI 98
Score = 41.5 bits (93), Expect = 0.021
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLK 319
FFFICIY HIGRG+YY S+ K
Sbjct: 89 FFFICIYFHIGRGLYYGSYLYK 110
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 90.2 bits (214), Expect = 5e-17
Identities = 51/139 (36%), Positives = 71/139 (51%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FF+ IYLHI +G+ S+ L V + YVL GQ+S+W A VIT+L
Sbjct: 79 FFLFIYLHIFKGLINSSYRLSSVWISGIAMYLVLMGIAFTGYVLIWGQMSYWAAVVITSL 138
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
++++PYLG +V I G F+V TL FY+ HF H TGS++ L
Sbjct: 139 MTSVPYLGKYMVWWIWGSFSVCENTLKFFYSIHFIFPWLLLVMVIFHLFFLHFTGSSSSL 198
Query: 617 GLNRNLDKIPFHPFFTFKD 673
+ + DKI F P + FKD
Sbjct: 199 YCHGDYDKIHFFPSYWFKD 217
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/61 (54%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+ L+ QIITG FLT YYTA AF V YI VN G ++R +H+NGAS FF YLH+
Sbjct: 30 IMLMSQIITGFFLTFYYTAGD--AFSSVQYIMFEVNLGWLVRIMHSNGASMFFLFIYLHI 87
Query: 274 F 276
F
Sbjct: 88 F 88
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 89.8 bits (213), Expect = 6e-17
Identities = 56/154 (36%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
FFI IYLH+ RG+ S+ + + + Y+LP GQ+S+WGA VI
Sbjct: 98 FFIVIYLHMFRGLLRGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVIV 157
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNN 610
NL +A+P +G L + G F + +ATL RF+ FHF H GSNN
Sbjct: 158 NLFAAVPVVGEDLSVWVRGDFVISDATLNRFFAFHFLLPFLLAGLVFLHIVALHHVGSNN 217
Query: 611 PLGL--------NRNLDK-----IPFHPFFTFKD 673
P G+ NR DK IPFHP++T KD
Sbjct: 218 PDGIEIKEGPKGNRWSDKAPADGIPFHPYYTVKD 251
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
L L+IQI+TG++L + Y + +AF V YI R+V++G +IR +H+ GAS FF YLH+
Sbjct: 47 LTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFIVIYLHM 106
Query: 274 F 276
F
Sbjct: 107 F 107
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 89.4 bits (212), Expect = 8e-17
Identities = 51/139 (36%), Positives = 67/139 (48%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FFI +YLHI +G+++ S+ LK V + YVL Q+SFW A VIT+L
Sbjct: 87 FFIFLYLHIFKGLFFMSYRLKKVWMSGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSL 146
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
LS IP G +V I GF V ATL F+ HF H TGS + L
Sbjct: 147 LSVIPIWGPTIVTWIWSGFGVTGATLKFFFVLHFLLPWAILVIVLGHLIFLHSTGSTSSL 206
Query: 617 GLNRNLDKIPFHPFFTFKD 673
+ + DK+ F P + KD
Sbjct: 207 YCHGDYDKVCFSPEYLGKD 225
Score = 62.9 bits (146), Expect = 8e-09
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+ LI QI+TG FL YYT + +AF V YI VN+G + R H NGAS FF YLH+
Sbjct: 36 MVLIFQILTGTFLAFYYTPDSLMAFSTVQYIMYEVNFGWVFRIFHFNGASLFFIFLYLHI 95
Query: 274 F 276
F
Sbjct: 96 F 96
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 89.0 bits (211), Expect = 1e-16
Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
FF+ +YLH+ RG+ Y S+ + V + Y+LP GQ+S+WGA VI
Sbjct: 111 FFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQMSYWGAQVIV 170
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH-FXXXXXXXXXXXXXXXXXHQTGSN 607
NL SAIP++G L I G + V +ATL RF++FH H GSN
Sbjct: 171 NLFSAIPFIGPDLALLIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHLLALHDVGSN 230
Query: 608 NPLGL------------NRNLDKIPFHPFFTFKD 673
NP G+ LD +PFHP++T D
Sbjct: 231 NPDGIEIKGPGKPVDEHGHPLDGVPFHPYYTVHD 264
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
L L+IQI+TG+FL ++Y + AF V YI R+V +G +IR +H+ GAS FF YLH+
Sbjct: 60 LVLVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAFFVVVYLHM 119
Query: 274 F 276
F
Sbjct: 120 F 120
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 87.8 bits (208), Expect = 2e-16
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Frame = +2
Query: 260 FICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
F C+Y+HIGR ++Y S+ + + L YVLP GQ+S+WGATVI N
Sbjct: 103 FACLYIHIGRSLWYGSYKAPRELLWLTGLGLMLMVMVTAFAGYVLPWGQMSYWGATVILN 162
Query: 434 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNP 613
+ AIP +G L + GG + N L R + HF H SNNP
Sbjct: 163 AVHAIPLIGQPLSELLLGGDTLGNVALHRLFVLHFTMAFAILGVIALHVAALHVVKSNNP 222
Query: 614 LGLN--RNLDKIPFHPFFTFKD 673
G++ +PFHP++T +D
Sbjct: 223 SGVDPVNPSQTLPFHPYYTSRD 244
Score = 41.9 bits (94), Expect = 0.016
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+ I +GLFL I YT +I AF V I R V G IR+LH G + F Y+H+
Sbjct: 53 MAFMIASGLFLAINYTPDITQAFASVEAIDRQVPSGWFIRSLHMGGVTMLFACLYIHI 110
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 86.2 bits (204), Expect = 7e-16
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RK+HP+ KIIN+ +CL++QIITGLFL ++YTA+ AF
Sbjct: 5 RKSHPLMKIINHSFIDLPAPSNFYSWWNFGSLLGVCLLLQIITGLFLAMHYTADTTSAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+ +ICR+VNYG +IR HANGAS FF Y+H+
Sbjct: 65 SIAHICRDVNYGWVIRYTHANGASMFFICLYIHI 98
Score = 37.1 bits (82), Expect = 0.45
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLK 319
FFIC+Y+HI RG+YY S+ K
Sbjct: 90 FFICLYIHIARGLYYGSYLFK 110
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 85.8 bits (203), Expect = 1e-15
Identities = 52/132 (39%), Positives = 65/132 (49%)
Frame = +2
Query: 260 FICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 439
F+ YLHI RG+ Y L + YVLP GQ+S+WGATVITNLL
Sbjct: 86 FLLTYLHILRGLNYSYMYLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATVITNLL 145
Query: 440 SAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPLG 619
S+IP + V I GG+ V + T+ RF+ HF H GS NPLG
Sbjct: 146 SSIP----VAVIWICGGYTVSDPTIKRFFVLHFILPFIGLCIVFIHIFFLHLHGSTNPLG 201
Query: 620 LNRNLDKIPFHP 655
+ L KIPF+P
Sbjct: 202 YDTAL-KIPFYP 212
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+ IQIITG+FL YT ++ A+Y + +I R + G R +HA GAS F YLH+
Sbjct: 34 IIFFIQIITGVFLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHI 93
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 85.4 bits (202), Expect = 1e-15
Identities = 53/141 (37%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYES-FNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
F F+ ++LH+GR ++Y S F YVLP GQ+SFWGATVIT
Sbjct: 96 FVFLFLFLHLGRAMFYGSYFYNPNTWFSGIILFLFLMAIAFMGYVLPFGQMSFWGATVIT 155
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNN 610
NLLS P L+ + GG+ V + TL RF+ FH+ H SNN
Sbjct: 156 NLLSPFP----SLIEWVSGGYCVHSPTLKRFFLFHYQLPFLVCGFSILHLFYLHFLSSNN 211
Query: 611 PLGLNRNLDKIPFHPFFTFKD 673
PL + N +KIPF P KD
Sbjct: 212 PLRNSTN-NKIPFFPLIFDKD 231
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/60 (40%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF---FFYLHL 273
+ +I+QIITG+ L ++YT+++ A++ + ++ R V YG +R H++GASF F +LHL
Sbjct: 46 VAIILQIITGILLALHYTSDLNSAYFSLFFLIREVFYGWCLRYFHSSGASFVFLFLFLHL 105
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 83.0 bits (196), Expect = 7e-15
Identities = 42/78 (53%), Positives = 48/78 (61%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FFICIY HI RG+YY S+ K V L YVLP GQ+SFW ATVITNL
Sbjct: 82 FFICIYTHIARGLYYGSYMNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITNL 141
Query: 437 LSAIPYLGTILVN*I*GG 490
L+AIPYLGT + + GG
Sbjct: 142 LTAIPYLGTTMTXWLWGG 159
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTYR 285
CL +Q+ TG FL I+YTA++ +AF V +I R+V YG +++ HA GAS FF + ++T+
Sbjct: 32 CLALQMTTGFFLAIHYTADVNLAFSSVVHIMRDVPYGWMMQNTHAIGASLFF-ICIYTHI 90
Query: 286 TRNL 297
R L
Sbjct: 91 ARGL 94
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Frame = +1
Query: 4 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 183
KTHPI + N+ +CLIIQI+TG+FL ++YT ++++AF
Sbjct: 5 KTHPILGLANSYLIDSPQPSNISYMWNFGSLLGVCLIIQILTGVFLAMHYTPSVDLAFIS 64
Query: 184 VNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
V +I R+VNYG +IR LHAN ASFFF YLH+
Sbjct: 65 VEHIMRDVNYGWLIRYLHANTASFFFIFVYLHI 97
Score = 37.9 bits (84), Expect = 0.26
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESF 310
FFFI +YLHIGRG+YY S+
Sbjct: 88 FFFIFVYLHIGRGLYYGSY 106
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 81.4 bits (192), Expect = 2e-14
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
FF +Y+H+ RG+YY S+ + V L Y L GQ+S+W A VIT
Sbjct: 105 FFAALYIHMFRGVYYGSYKAPREVVWLIGVLLFMLAMATAFLGYSLVWGQMSYWAAQVIT 164
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNN 610
L S +P++G + + GGFA + AT+ RF+ HF H+ GS N
Sbjct: 165 GLFSVVPFVGEKIRIWVLGGFAPNAATVNRFFVLHFTLPFVILAVVGLHVWALHRQGSGN 224
Query: 611 PLGL--NRNLDKIPFHPFFTFKD 673
P G+ + + +P P++ KD
Sbjct: 225 PTGIEVKKAEEVVPMQPYYIAKD 247
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+ L IQIITGL L ++Y A+ AF + I R V +G +IR H GAS FF Y+H+
Sbjct: 54 IALTIQIITGLALAMHYVASSNEAFNSIEAIMRYVGFGWLIRYGHMVGASLFFAALYIHM 113
Query: 274 F 276
F
Sbjct: 114 F 114
>UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep:
Cytochrome b - Aleyrodes elevatus
Length = 232
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +2
Query: 419 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQT 598
TVITNLLS+IP G ++V I GG++V N TL RF++FHF H
Sbjct: 1 TVITNLLSSIPIWGEMIVYWIWGGYSVGNPTLIRFFSFHFFFPFLMIFTIFLHLIFLHGH 60
Query: 599 GSNNPLGLNRNLDKIPFHPFFTFKD 673
GS NPLGL + DKI F+P+F KD
Sbjct: 61 GSGNPLGLGGSYDKIYFYPYFMLKD 85
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 78.2 bits (184), Expect = 2e-13
Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
F F +++H RGI SF L + YVLP GQ+SFWGATVI N
Sbjct: 82 FVFFLMFMHFFRGIIQSSFYLVLPWISGFVLMLLTMAAAFLGYVLPWGQMSFWGATVIIN 141
Query: 434 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNP 613
LLS +PY G +LV + GGF V AT + F+ H+ H +GS++
Sbjct: 142 LLSILPY-GKMLVVWLWGGFYVSAATCSFFFALHYIVPFAVLVVIMVHLFFLHFSGSSSF 200
Query: 614 LGLNRNLD-KIPFHPFFTFKD 673
G+N + K+ F F+ KD
Sbjct: 201 GGMNYSDSLKVKFGLLFSLKD 221
Score = 40.7 bits (91), Expect = 0.037
Identities = 22/66 (33%), Positives = 40/66 (60%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTY 282
+ + IQ+ +GL L Y++ +A+ V I R V G ++R++H+N ASF F+L +F +
Sbjct: 33 ILMAIQVASGLILAFCYSSGF-LAWSSVVEITREVYAGWLVRSIHSNTASFVFFL-MFMH 90
Query: 283 RTRNLL 300
R ++
Sbjct: 91 FFRGII 96
>UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:
Cytochrome b - Elephas maximus (Indian elephant)
Length = 102
Score = 77.8 bits (183), Expect = 3e-13
Identities = 40/93 (43%), Positives = 56/93 (60%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTYR 285
CL+ QI+TGLFL I Y + AF +++ICR+VNYG IIRT + L + T+
Sbjct: 8 CLVAQILTGLFLAIRYAPDTITAFSSISHICRDVNYGWIIRTTXLQRSIHLLPLPVCTHW 67
Query: 286 TRNLL*IF*LKICMINWNYNFIYTNSNCFHRLC 384
T+ LL I L + +W+Y I +S CFHR+C
Sbjct: 68 TKYLLWILPLLRNLKHWHYTTINYHSYCFHRIC 100
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 77.8 bits (183), Expect = 3e-13
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Frame = +2
Query: 260 FICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 439
F +Y+HIGR +YY S+ + V Y+LP Q+S+W ATV+T+++
Sbjct: 80 FFLVYVHIGRSLYYSSYRMIGVWNVGFFIYVILMVEAFLGYILPWHQMSYWAATVLTSII 139
Query: 440 SAIPYLGTILVN*I*GGFAVDNA-TLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
++P +G ++ + + GGF+V TL R + H HQ+GS +PL
Sbjct: 140 LSVPVVGGLIFSYVVGGFSVTLIDTLVRVFPVHISLGFILLGLIVLHLFYLHQSGSTSPL 199
Query: 617 GL-NRNLDKIPFHPFFTFKD 673
N D + FH + T KD
Sbjct: 200 FFYNGYSDCVYFHSYHTIKD 219
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 77.4 bits (182), Expect = 3e-13
Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTY 282
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF + +F +
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMV-MFMH 96
Query: 283 RTRNLL*IF*LKICMINWNYN---FIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPL 453
+ L + WN FI T + F C + + GN N S + N +
Sbjct: 97 MAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYC-CVYGQMSHWGNMNIASNMFNMM 155
Query: 454 FRNYISKLNL 483
Y+ L L
Sbjct: 156 KTIYMMMLML 165
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/60 (60%), Positives = 47/60 (78%), Gaps = 3/60 (5%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
LCLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR +HANGAS FF +LH+
Sbjct: 20 LCLIIQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHV 79
Score = 53.6 bits (123), Expect = 5e-06
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2
Query: 590 HQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
H+TGSNNP GLN + DKIPFHP++T KD
Sbjct: 120 HETGSNNPTGLNSDADKIPFHPYYTIKD 147
Score = 41.1 bits (92), Expect = 0.028
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNL 316
FFIC++LH+GRG+YY S+N+
Sbjct: 71 FFICLFLHVGRGVYYGSYNM 90
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 76.2 bits (179), Expect = 8e-13
Identities = 34/65 (52%), Positives = 51/65 (78%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTY 282
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF + +F +
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMV-MFMH 96
Query: 283 RTRNL 297
+ L
Sbjct: 97 MAKGL 101
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Frame = +2
Query: 233 YMLMELH-----FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP 391
Y+L LH FFF+ +++H+ +G+YY S+ V L Y
Sbjct: 76 YILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCV 135
Query: 392 *GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDN 505
GQ+S WGATVITNL SAIP++G +V+ + GGF +++
Sbjct: 136 YGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFNMED 173
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 74.9 bits (176), Expect = 2e-12
Identities = 46/147 (31%), Positives = 65/147 (44%)
Frame = +2
Query: 233 YMLMELHFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFW 412
Y + + F+F +++HI +G++Y S + + YVLP GQ+SFW
Sbjct: 72 YHSVGVSFYFFFMFIHIIKGMWYSSKYMPWSWYSGIVILILSIVIAFTGYVLPDGQMSFW 131
Query: 413 GATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXH 592
GATVI+NLL I GGF V TL RF+ HF H
Sbjct: 132 GATVISNLLEWFGKAKVITF----GGFTVGPETLKRFFILHFVLPAVVLVIVLLHLYFLH 187
Query: 593 QTGSNNPLGLNRNLDKIPFHPFFTFKD 673
+ GS+NPL L + + F+ F D
Sbjct: 188 REGSSNPLTLAEAVALLKFYQLILFSD 214
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 73.7 bits (173), Expect = 4e-12
Identities = 51/155 (32%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
FFI +YLH+ RG+ Y S + V + YVLP GQ+SFWGA VI
Sbjct: 104 FFIGVYLHMFRGLIYGSGKKPRELVWVLGMLMYVVLMVEAFVGYVLPWGQVSFWGAKVII 163
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH-FXXXXXXXXXXXXXXXXXHQTGSN 607
+L AIP +G L I G + + TL RF+ H GSN
Sbjct: 164 SLFGAIPVIGNGLDEWIMGDYLPSDVTLNRFFALHVIALPLLLGFLVVLHLVALRGVGSN 223
Query: 608 NPLGLN-------------RNLDKIPFHPFFTFKD 673
NP G++ ++ D IPFHP++T K+
Sbjct: 224 NPDGIDIHQGPKGNRWDSMQSADSIPFHPYYTLKE 258
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFF---YLHLF 276
L+ Q++TG+FL ++Y ++ AF + I R+V +G +IR +H+ GAS FF YLH+F
Sbjct: 54 LVNQVVTGIFLAMHYKPSVAEAFQSIEMTIMRDVEWGWLIRYMHSTGASLFFIGVYLHMF 113
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 71.7 bits (168), Expect = 2e-11
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Frame = +2
Query: 233 YMLME-LHFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQI 403
YM ++ + FI +Y H+ RG+ Y S + V + YVLP G +
Sbjct: 85 YMHVDGVSLIFILLYTHMFRGLLYGSHRAPRELVWVIGYVIYLLMMAEAFVGYVLPFGNL 144
Query: 404 SFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH-FXXXXXXXXXXXXXX 580
S+W VIT+++ A+P +G L GG + +ATL R H
Sbjct: 145 SYWAGEVITSIMHALPVVGPSLTTLTRGGPGIGSATLQRLLALHVVLFFLIILAAIALHI 204
Query: 581 XXXHQTGSNNPLGLN---------RNLDKIPFHPFFTFKD 673
H+ GSNNP G++ + LD +PFHP++T KD
Sbjct: 205 VALHRVGSNNPDGIDIKKHKGPDGKPLDGVPFHPYYTVKD 244
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLK--YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 430
FF +YLHIGRG+YY S+ YVLP GQ+S WGATVIT
Sbjct: 89 FFFLVYLHIGRGLYYGSYKTPRTLTWAIGTVILIVMMATAFLGYVLPYGQMSLWGATVIT 148
Query: 431 NLLSAIPYLGTILVN*I*GGFAVD 502
NL+SAIP++G +V I GG D
Sbjct: 149 NLMSAIPWIGQDIVEFIWGGLYTD 172
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +1
Query: 4 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 183
K+HP+ KI+N+ ALCL IQI+TG+ L ++YT ++ AF
Sbjct: 5 KSHPLLKIVNSYIIDSPQPANLSYLWNFGSLLALCLGIQIVTGVTLAMHYTPSVSEAFNS 64
Query: 184 VNYICRNVNYG*IIRTLHANGASFFFYL 267
V +I R+VN G ++R LH+N AS FF+L
Sbjct: 65 VEHIMRDVNNGWLVRYLHSNTASAFFFL 92
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 70.5 bits (165), Expect = 4e-11
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = +2
Query: 224 FEHYMLMELHFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*G 397
+ H + F+ IY+H+ GIYY S+ + + + Y+LP G
Sbjct: 90 WRHMHAVAASVVFLVIYIHMFTGIYYASYKRGREMIWISGMLLFVTFSAEAFSGYMLPWG 149
Query: 398 QISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Q+S+W A VITNL IP++G LV I G F V + TLTRF+ H
Sbjct: 150 QMSYWAAQVITNLFGGIPFIGDDLVVWIRGNFYVSDPTLTRFFMLH 195
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Frame = +1
Query: 115 IQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFF---YLHLFT 279
I +I+G+FL +YY + ++AF VNY I + V +G + R +HA AS F Y+H+FT
Sbjct: 53 ILLISGIFLLMYYKPDTKLAFDSVNYTIMQEVWFGWLWRHMHAVAASVVFLVIYIHMFT 111
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = +1
Query: 4 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 183
K+HP+ K++N+ A CLIIQI+TG+ L ++Y+ N+ AF
Sbjct: 5 KSHPLLKLVNSYLIDASQPSNISYLWNFGSLLACCLIIQIVTGVTLAMHYSPNVLEAFNS 64
Query: 184 VNYICRNVNYG*IIRTLHANGASFFFYL 267
+ +I R+VN G ++R LH+N AS FF+L
Sbjct: 65 IEHIMRDVNNGWLVRYLHSNTASAFFFL 92
Score = 33.9 bits (74), Expect = 4.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESF 310
FF +YLHIGRG+YY S+
Sbjct: 89 FFFLVYLHIGRGMYYGSY 106
>UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep:
Cytochrome oxidase B - Pyura haustor
Length = 137
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/94 (42%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = +2
Query: 407 FWGA-----TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXX 571
FWG +VI NLL+ IP++G VN GGF V ATLTRFYTFHF
Sbjct: 2 FWGQGGFEESVIPNLLNPIPFIGGDTVNWAWGGFFVGGATLTRFYTFHFLFPFILVVLSM 61
Query: 572 XXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
H+ GS+NPL N K+ F P+ KD
Sbjct: 62 LHLVFLHEGGSSNPLKGTNNSFKVWFWPYNGVKD 95
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/88 (37%), Positives = 50/88 (56%)
Frame = +1
Query: 4 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 183
K+HP+ K++N A+CLIIQI+TG+ L ++Y ++ AF
Sbjct: 5 KSHPLLKLVNMYIIDHSQPSNISYLWNFGSLLAVCLIIQIVTGVTLAMHYNPSVAEAFNS 64
Query: 184 VNYICRNVNYG*IIRTLHANGASFFFYL 267
+ +I R+VN G +IR LH+N AS FF+L
Sbjct: 65 IEHIMRDVNNGWLIRYLHSNTASAFFFL 92
Score = 66.9 bits (156), Expect = 5e-10
Identities = 36/78 (46%), Positives = 45/78 (57%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FF +YLHIGRG+YY S+ YVLP GQ+S WGATVITNL
Sbjct: 89 FFFLVYLHIGRGLYYASYRAPRT------------LAWVSLYVLPYGQMSLWGATVITNL 136
Query: 437 LSAIPYLGTILVN*I*GG 490
+SAIP++G +V + GG
Sbjct: 137 ISAIPWIGQDIVEFVWGG 154
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 494 AVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQT-GSNNPLGLNRNLDKIPFHPFFTFK 670
+V+NATL RF+ HF H T G++NPLG+ D+IPF P+F FK
Sbjct: 208 SVNNATLNRFFALHFVLPFVLAALALMHLIAVHDTAGASNPLGVPGYYDRIPFAPYFLFK 267
Query: 671 D 673
D
Sbjct: 268 D 268
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 65.3 bits (152), Expect = 1e-09
Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGATVI 427
FFF C YLHI R +YY + Y+ + Y L GQ S+W ATVI
Sbjct: 88 FFFAC-YLHIFRAMYYNVYRKPYLKMWMISVTLYVLLMITAFLGYSLIWGQKSYWAATVI 146
Query: 428 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHF 538
T AIP++G L + + GG+A TL RFY HF
Sbjct: 147 TGFTRAIPWVGDTLYSFLVGGYAPGTPTLGRFYVLHF 183
Score = 50.0 bits (114), Expect = 6e-05
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Frame = +1
Query: 115 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHLFTYR 285
+QI++GL L ++Y +AF + +I R+V +G ++R H+ GAS FF YLH+F
Sbjct: 41 VQILSGLVLAMFYVPTEGLAFDSIIHIMRSVRHGELVRNAHSIGASLFFFACYLHIFRAM 100
Query: 286 TRNLL*IF*LKICMIN 333
N+ LK+ MI+
Sbjct: 101 YYNVYRKPYLKMWMIS 116
>UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:
Cytochrome b - Partula turgida
Length = 211
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/85 (37%), Positives = 40/85 (47%)
Frame = +2
Query: 485 GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFT 664
GGF+V ATL RF++ HF H+ GS NPLG N +++KI FHP+FT
Sbjct: 6 GGFSVGQATLNRFFSLHFILPFIILVLVIVHLMFLHEKGSTNPLGHNMHINKILFHPYFT 65
Query: 665 FKDXXXXXXXXXXXXXXXXXNPYLL 739
KD PYLL
Sbjct: 66 LKDVVGFLLVLFCLIMMCAYFPYLL 90
>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
(redback poison frog)
Length = 109
Score = 63.3 bits (147), Expect = 6e-09
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAF--------------------YRVNYICRNVNYG*I 222
LCLI QIITGLFL ++YTA+ +AF V +ICR+VNYG +
Sbjct: 3 LCLIAQIITGLFLAMHYTADTSMAFSSIAHICRDVNNGWLLRSLLSSVAHICRDVNYGWL 62
Query: 223 IRTLHANGASFFF---YLHL 273
+R LHANGASFFF YLH+
Sbjct: 63 LRNLHANGASFFFICIYLHI 82
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESF 310
FFFICIYLHIGRG+YY SF
Sbjct: 73 FFFICIYLHIGRGMYYGSF 91
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = -1
Query: 260 KKNEAPLACNVRIIQP*FTFRQI*FTL*KAISIFAV*YIVKNNPVXXXXIRHKASRDPIF 81
KKN+APL +R+ P FT RQ+ T KA+ + V + KN+PV I+HK S +P F
Sbjct: 3 KKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCMAKNSPVWIWVIKHKPSNEPKF 62
Query: 80 HQEEILDGLGKSINELLMI 24
H E+L+G GKS + L I
Sbjct: 63 HHTEMLEGAGKSTSASLSI 81
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 61.7 bits (143), Expect = 2e-08
Identities = 34/93 (36%), Positives = 44/93 (47%)
Frame = +2
Query: 395 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXX 574
GQ+SFWG + AI +G V GF+VD TL + H
Sbjct: 129 GQMSFWGXXXXXSXXXAIXXVGDTXVTXXXXGFSVDXXTLNXXXSLHHXLPLILVGASLL 188
Query: 575 XXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
HQ GSNNPLG++ +DKI +P+F KD
Sbjct: 189 HLAALHQYGSNNPLGVHSEMDKIAPYPYFYVKD 221
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/62 (41%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFFYLHLFT 279
+ L+IQI+TG+FL +++T ++++AF V ++ R+V G ++R +HANGAS F +HL
Sbjct: 30 ISLVIQIVTGVFLAMHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFLIVVHLXI 89
Query: 280 YR 285
+R
Sbjct: 90 FR 91
>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
Length = 108
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/54 (50%), Positives = 30/54 (55%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 415
FFFICIYLHIGRG+YY S+ K YVLP GQ+SFWG
Sbjct: 55 FFFICIYLHIGRGLYYGSYMNKETWNVGIILLLMLMATAFVGYVLPWGQMSFWG 108
>UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum
lineare|Rep: Cytochrome b - Microstomum lineare
Length = 234
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +2
Query: 419 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQT 598
+V TN LS +PYLG L+ I GG V ++ RF++ HF H +
Sbjct: 3 SVXTNFLSTLPYLGVFLLYSIWGGLNVCEISVYRFFSLHFIMPFVLVVLSIIHMAMLHVS 62
Query: 599 GSNNPLGLNRNLDKIPFHPFFTFKD 673
S+NPL +N N D + F P+F KD
Sbjct: 63 VSSNPLHIN-NKDFLSFFPYFWSKD 86
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/66 (45%), Positives = 34/66 (51%)
Frame = +2
Query: 260 FICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 439
F YLHI RG+ Y L + YVLP GQ+S+WGATVITNLL
Sbjct: 252 FFLTYLHILRGLNYSYLYLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLL 311
Query: 440 SAIPYL 457
S IP L
Sbjct: 312 SGIPAL 317
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYL 267
+ IQI+TG+FL Y+ I A+Y + +I R + G R +HA GAS F+L
Sbjct: 200 IIFFIQILTGVFLASRYSPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFFL 254
>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
sebastis|Rep: Cytochrome b - Microcotyle sebastis
Length = 386
Score = 54.8 bits (126), Expect = 2e-06
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Frame = +2
Query: 260 FICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXX-YVLP*GQISFWGATVITNL 436
FIC+ HIGRG+YY S++ V Y+LP Q+S+W VI+ +
Sbjct: 103 FICLLGHIGRGLYYCSYSKNPVLWSFGMILYVVILIEAFLGYLLPWHQMSYWAGVVISTI 162
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
++P +G L + + G + + +R + H H+ GS+N
Sbjct: 163 FLSLPVIGPHLYSFLLGSYDFGDGIXSRVFCVHVCFGFVIIALIVLHLVNLHKIGSSNSF 222
Query: 617 GLNRNL-DKIPFHPFFTFKD 673
+ D I FH + +KD
Sbjct: 223 NSGDSYSDVIFFHXGYGYKD 242
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 54.4 bits (125), Expect = 3e-06
Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 254 FFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 433
F FI YLHI RG+ Y L + YVLP GQ+SFW TVITN
Sbjct: 84 FVFILTYLHILRGLNYSYSYLPLSWISGLMIFLISIVTAFYGYVLPWGQMSFWNTTVITN 143
Query: 434 LLSAIPYL-GTILVN*I*GGFAVDNATLTRFYTF 532
LL YL T ++ GG+ V + TL RF+ F
Sbjct: 144 LL----YLFRTCFMD--CGGYLVSDPTLKRFFVF 171
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+ IQI+ G+ L + + A+Y V +I R + G R +HA GASF F YLH+
Sbjct: 34 IVFFIQILKGVLLALVILQKLSYAYYSVQHILRAIMDGWCFRYMHATGASFVFILTYLHI 93
>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
Cytochrome b - Aquifex aeolicus
Length = 409
Score = 54.0 bits (124), Expect = 4e-06
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Frame = +2
Query: 251 HFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 424
+FF +YLH+ GIYY ++ + V + Y+LP GQ+S+WG V
Sbjct: 95 NFFMAIVYLHMFTGIYYNAYKRPRELVWIVGWLIYFVLILTALSGYLLPWGQLSYWGFIV 154
Query: 425 ITNL---LSAIPYLGTI-------LVN*I*GGFAVDNATLTRFYTFH-FXXXXXXXXXXX 571
T + L+ P L I +V + GG+ V + TL R + H
Sbjct: 155 TTEIPGSLADAPILKPIFKAIAETIVLWMKGGYVVTDVTLGRVFGSHVLIYPLILLALVG 214
Query: 572 XXXXXXHQTGSNNPLGL----NRNLDK-IPFHPFFTFKD 673
G +NP G+ +N DK +PFHP+ T K+
Sbjct: 215 IHLYLVRAAGISNPEGIEYDKKKNPDKFVPFHPYMTLKE 253
>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
Cytochrome b - Meloidogyne hapla (Root-knot nematode
worm)
Length = 132
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
IIQ+I+GL L++YY++ +F + Y+ VN G +IR +H N SFFF +LH+
Sbjct: 38 IIQVISGLMLSLYYSSESNFSFNSIQYLMIEVNKGWLIRLIHFNLVSFFFMMLFLHI 94
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+LP Q+SFW TV TN AIP +G LV + GG V TL RF+ H
Sbjct: 140 YLLPWSQLSFWATTVATNSAGAIPVIGGYLVEFLRGGKLVGPPTLGRFFAVH 191
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 115 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS 252
IQ++TG+ L IYY + + AF V I +V +G +IR HA G++
Sbjct: 50 IQVVTGILLLIYYVPDADKAFRSVTAIMNDVPFGWLIRMCHAVGSN 95
>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
Anaeromyxobacter sp. Fw109-5
Length = 448
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+LP Q+++W TV TN+ SA+P +G + + GG +D TL RFY H
Sbjct: 169 YLLPWDQLAYWAVTVGTNIASAVPLVGAEVRELLLGGRNIDQPTLIRFYVLH 220
>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
b gene - Chlamydomonas smithii
Length = 374
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHL 273
+ L Q++TG+ L ++Y +++ AF V ++ +V G I+R HANGAS FF YLH+
Sbjct: 38 MMLASQMLTGILLAMHYVGHVDYAFASVQHLMTDVPSGMILRYAHANGASLFFIVVYLHV 97
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y LP QI +W ++T + AIP +G+ LV + G +V +TLTRFY+ H
Sbjct: 136 YSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLH 187
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS---FFFYLHLF 276
C ++Q+ TG +T YY + AF V YI N+G +IR++H AS LH+F
Sbjct: 43 CFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVF 102
>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 333
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+LP Q+S+W T++TN+L +P +G L + GG V+ TL+ FY H
Sbjct: 45 YLLPWDQLSYWAVTIMTNILEYLPLVGNNLAIIVRGGEYVNGNTLSIFYNLH 96
>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 115
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +1
Query: 259 FYLHL-F-TYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYK 432
+ LHL F T+R+R LL + + + +Y Y ++N FH L +R NI LG N N+K
Sbjct: 46 YALHLPFPTHRSRPLLWLISPSRNLKHRHYTPSYNHNNSFHGLRSPMRPNIILGSNSNHK 105
Query: 433 SIICNPLFRN 462
I NP++RN
Sbjct: 106 PTISNPVYRN 115
>UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon
domesticum|Rep: Cytochrome b - Trichosporon domesticum
Length = 132
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +2
Query: 431 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHF 538
N+LSAIP++G V + GGF+V+NATL RF++ H+
Sbjct: 28 NMLSAIPWIGQDFVEFVWGGFSVNNATLNRFFSLHY 63
Score = 42.7 bits (96), Expect = 0.009
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 599 GSNNPLGLNRNLDKIPFHPFFTFKD 673
GS+NPLG++ N D+IP HP++ FKD
Sbjct: 2 GSSNPLGISSNSDRIPMHPYYMFKD 26
>UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_110, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 184
Score = 46.0 bits (104), Expect = 0.001
Identities = 32/91 (35%), Positives = 43/91 (47%)
Frame = +2
Query: 401 ISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXX 580
+SFWGAT T + Y + + G F D ATL F++ H
Sbjct: 1 MSFWGATHHTY---SRRYHNDLAL----GWFLYD-ATLNYFFSLHHLLSFVLVGDILFHL 52
Query: 581 XXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
HQ GSNNPLG++ LDKI F+P+ K+
Sbjct: 53 VALHQYGSNNPLGVHLELDKISFYPYCFVKN 83
>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
cytochrome b subunit; n=24; Bacillaceae|Rep:
Menaquinol-cytochrome c reductase cytochrome b subunit -
Bacillus subtilis
Length = 224
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/60 (36%), Positives = 38/60 (63%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTYRTR 291
+IQ+++G+FLT+YY +I+ A+ V Y+ V +G I+R +H GAS + +F + R
Sbjct: 53 VIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVIVM-MFLHTLR 111
>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 250
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
YVLP +S+WG TV +N+L+ +P +GT L I G +++ TL + + H
Sbjct: 104 YVLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEYINDFTLLKLHVLH 155
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLH---ANGASFFFYLHL 273
L ++Q +TGLFL +YY E AF V I V +G IR+LH AN +LH+
Sbjct: 40 LAFLVQCVTGLFLALYYKPTPEAAFASVQMITNEVRFGATIRSLHHWAANLMILLVFLHM 99
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+LP Q+S+W + + ++P +G + + GG V L+RFY H
Sbjct: 134 YLLPYEQLSYWASVIGAETAGSLPVVGATMKIMMQGGIKVTAEMLSRFYVLH 185
>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
javanica|Rep: Cytochrome b - Meloidogyne javanica
(Root-knot nematode worm)
Length = 113
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYL 267
+ +Q+I+GL L+++Y ++ +F + Y+ VN G +IR +H N S FF L
Sbjct: 35 IIFFMQVISGLLLSLFYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLFFML 89
>UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;
Symbiobacterium thermophilum|Rep: Menaquinol-cytochrome
C reductase - Symbiobacterium thermophilum
Length = 258
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 HFFFICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 424
H I ++LH+ R Y S+ ++ + Y+LP Q+++W V
Sbjct: 113 HGMVIAVWLHMTRVFYTGSYKPPREFNWVIGVALFLITVLLSFTGYLLPWDQLAYWAIQV 172
Query: 425 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
+N+ P +GT + + G+ + ATL R+YT H
Sbjct: 173 GSNMAKVTPVIGTYVQRALLDGYDIGPATLVRWYTLH 209
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+LP Q +W V T L+ IP +G L + GG +ATLTRF+ H
Sbjct: 136 YLLPWDQKGYWATKVATTLMGLIPAIGGDLQKVVVGGTDYGHATLTRFFALH 187
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLH 237
++Q+ITG FL + Y+AN + A+ V YI + G I+R LH
Sbjct: 45 VVQMITGTFLWMAYSANSKGAWESVYYIQYEMQGGWILRGLH 86
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+LP + ++WG V TN++ +P +G +L + I GG + TL+ F+ H
Sbjct: 146 YLLPWDERAYWGTIVGTNMIGLVPVVGPLLKSAIRGGSGLGALTLSHFFAIH 197
Score = 33.9 bits (74), Expect = 4.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYTANIEIAFYRVNYICR----NVNYG*IIRTLHANGASFFFYL 267
LI+Q +TG+ L YY + A+ VNYI ++ G +IR H GAS L
Sbjct: 50 LILQFVTGVMLAFYYGGTPDHAWDSVNYIDHLHYGTLDVGRLIRGFHYWGASIMVVL 106
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 41.5 bits (93), Expect = 0.021
Identities = 22/38 (57%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 172 AFYRVNYICRNVNYG*IIRTLHANGASFFF---YLHLF 276
AF V YI VNYG I R H NGAS FF YLH+F
Sbjct: 2 AFNVVXYIMYEVNYGWIFRIFHFNGASLFFVFLYLHIF 39
Score = 33.5 bits (73), Expect = 5.6
Identities = 46/139 (33%), Positives = 59/139 (42%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 436
FF+ +YLHI +G++ S+ LK
Sbjct: 30 FFVFLYLHIFKGLFMMSYRLKKXXASGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 89
Query: 437 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPL 616
V + GF V +ATL F+ HF H TGS + +
Sbjct: 90 XXXXXXXXXXXVMWVWSGFGVSSATLKFFFVXHFLVPWGLLLXVMFHXIFXHSTGSTSSM 149
Query: 617 GLNRNLDKIPFHPFFTFKD 673
+ D I F P + KD
Sbjct: 150 YCXGDYDXICFGPDYWNKD 168
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 41.1 bits (92), Expect = 0.028
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 HFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 424
HF + LH+ R + S+ +++ Y+LP Q++FW T+
Sbjct: 132 HFMVAVVILHMLRTYFTASYKAPRQFIWFTGMILLFMTLLLSFSGYLLPWDQLAFWAVTI 191
Query: 425 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
+++ A P +G + + GG + L RFY H
Sbjct: 192 GSSMADAAPGVGPAIGRLLRGGAEIGAGALLRFYLLH 228
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF 255
+++ ITGL L IYY+ + A+ + I +V G ++R +H GA F
Sbjct: 86 VLEAITGLVLMIYYSPSPNEAYATMTQIMNDVPLGGLMRNVHRLGAHF 133
>UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Rep:
Cytochrome b - Aegotheles savesi (New Caledonian
owlet-nightjar)
Length = 96
Score = 40.7 bits (91), Expect = 0.037
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNY 213
L+ I+TGL L ++YTA+ +AF V + CRNV Y
Sbjct: 4 LVTXILTGLLLAMHYTADATLAFSSVAHTCRNVQY 38
>UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula
marina DSM 3645|Rep: Apocytochrome b6 - Blastopirellula
marina DSM 3645
Length = 494
Score = 40.3 bits (90), Expect = 0.049
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 404 SFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
S+WG +V + +P+ G +V+ I GG + + TL+RF+T H
Sbjct: 151 SYWGVSVAVSAAGRVPFAGPSIVHLILGGEYIGSETLSRFFTLH 194
>UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep:
Cytochrome b - Antonina pretiosa
Length = 211
Score = 40.3 bits (90), Expect = 0.049
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 491 FAVDNATLTRFYTFHFXXXXXXXXXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFK 670
F ++ + RF+ HF H S+NPLG+N N+D I +P+ K
Sbjct: 1 FNINITLINRFFVIHFITPMLLIILIIIHINILHLKKSSNPLGMNNNIDLITLNPYSIMK 60
Query: 671 D 673
D
Sbjct: 61 D 61
>UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Rep:
Cytochrome b6 - Halobacterium salinarium (Halobacterium
halobium)
Length = 270
Score = 40.3 bits (90), Expect = 0.049
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+LP Q+++W + + +IP +G + + GGF++ ATL R Y H
Sbjct: 191 YLLPWDQLAYWAGQIGVEMSLSIPLVGDWVAQLMFGGFSLGQATLQRMYLLH 242
>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
Cytochrome b - Trypanoplasma borreli
Length = 372
Score = 39.9 bits (89), Expect = 0.064
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXX 559
Y LP +S+WG TV +N+L+ IP +G + I +++ TL + ++ H
Sbjct: 133 YTLPCTSMSYWGLTVFSNILATIPLIGIYICQWIWCSEFINDFTLLKLHSIHIFLPFVLL 192
Query: 560 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFH--PFFTF 667
H S++ L LD+ PF+ FF F
Sbjct: 193 FLIGAHFFVLHYFLSSDGL-----LDRFPFYYERFFFF 225
>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 499
Score = 39.5 bits (88), Expect = 0.085
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 398 QISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Q ++WG + +++S +P LG LV + GG + ATL+RF+ H
Sbjct: 146 QDAYWGLGIGASIVSRVPLLGPWLVTLVLGGPIIAGATLSRFFAMH 191
>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
Length = 665
Score = 39.5 bits (88), Expect = 0.085
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 386 LP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
LP Q +W + T + +P +G+ L + + GG N TLTR YT H
Sbjct: 142 LPWDQKGYWSYQIETGIAGTMPVIGSTLRSLVVGGSEFGNLTLTRLYTIH 191
>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
Cytochrome b - Eulemur mongoz (Mongoose lemur)
Length = 59
Score = 39.1 bits (87), Expect = 0.11
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +2
Query: 257 FFICIYLHIGRGIYYESFNL 316
FF+C+++HIGRG+YY SF L
Sbjct: 26 FFLCLFIHIGRGLYYGSFTL 45
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 38.7 bits (86), Expect = 0.15
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+LP Q+ +W A + T +L +IP +G L+ G + + TL RF+ H
Sbjct: 136 YLLPLDQVGYWAAIIGTKILGSIPIVGDQLLLLGQAGTKITDHTLMRFFIIH 187
Score = 36.7 bits (81), Expect = 0.60
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYL 267
L ++Q++TG+ L +YY +E A+ V +I V G +R++H A+ +
Sbjct: 42 LLFLVQVVTGIVLAVYYNPTMEGAYQSVMFINDEVFMGKALRSVHNIAANLMLIM 96
>UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Cytochrome b/b6,
N-terminal domain - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 358
Score = 38.7 bits (86), Expect = 0.15
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 383 VLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
+LP Q +W V +++S+IP +G + + + GG TLTRFY H
Sbjct: 141 LLPWDQKGYWTTQVRNSIISSIPVVGDLTLRLLQGGPRTGIVTLTRFYVLH 191
>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
Cytochrome b - Ovis aries (Sheep)
Length = 113
Score = 37.9 bits (84), Expect = 0.26
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 259 FYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFL 411
FYL ++ RTR +L I L M + + I NS+ HRLC T+R NI L
Sbjct: 62 FYLPIYACRTRPILWIIYLPRNMKHRSNPPICDNSHSIHRLCFTMRPNIXL 112
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 37.5 bits (83), Expect = 0.34
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+L Q FW + V + S P+LG + + + GG V ATL+RF+ H
Sbjct: 148 YLLRWDQDGFWASVVGIKIGSYSPFLGPYITHFLLGGDVVGPATLSRFFAIH 199
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF 255
+ +Q +TG+ L YY + A+ V YI +G +IR +H A+F
Sbjct: 56 ITLQFLTGILLLFYYVPTTDHAWNSVYYIMNEAYFGKLIRGIHYWSANF 104
>UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Cytochrome b/b6-like
protein - Plesiocystis pacifica SIR-1
Length = 587
Score = 37.5 bits (83), Expect = 0.34
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+LP Q +W V T ++ +P G + + + GG N T+TRFY H
Sbjct: 136 YLLPWDQKGYWATQVATGIMGTVPG-GEPMQHALQGGDQYGNLTITRFYALH 186
>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
cytochrome b subunit - Chlorobium tepidum
Length = 428
Score = 37.5 bits (83), Expect = 0.34
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS---FFFYLHLFT 279
IIQI+TGL L YY AF +I V +G +IR +HA A+ ++H+F+
Sbjct: 118 IIQILTGLLLLQYYKPTETDAFSSFLFIQGQVPFGWLIRQIHAWSANLMILMLFIHMFS 176
>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
russelli|Rep: Cytochrome b - Decapterus russelli (Indian
scad)
Length = 102
Score = 36.7 bits (81), Expect = 0.60
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 105 MSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFI 254
+ N N +W + + LH ++ N F +LP+CKL L +S TC W +
Sbjct: 7 LPNYPNPHWTLPCHTLHLRHRNCFHIRCTHLPRCKLRLTHSQHTCQWRIL 56
>UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 438
Score = 36.7 bits (81), Expect = 0.60
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y+LP Q++FW TV T++ P +G + + G V L RFY H
Sbjct: 172 YLLPWDQLAFWAITVGTSIAGYAPVVGQDIKFLLLGDATVGQEALLRFYVLH 223
>UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 545
Score = 36.7 bits (81), Expect = 0.60
Identities = 25/98 (25%), Positives = 37/98 (37%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFHFXXXXXXX 559
Y+LP ++WG V T + + P +G L + G +V T RFY H
Sbjct: 140 YLLPWDNRAYWGTVVATKIAAQAPVVGPYLSRLLGGEGSVGVVTFARFYGLHVLLLPPAT 199
Query: 560 XXXXXXXXXXHQTGSNNPLGLNRNLDKIPFHPFFTFKD 673
+ P+ + L K F+P FKD
Sbjct: 200 IFLVILHVFLVRKHGVAPVPGDELLPKKQFYPAQVFKD 237
>UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Rep:
Cytochrome b - Lyristes plebejus
Length = 132
Score = 36.7 bits (81), Expect = 0.60
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +1
Query: 451 LFRNYISKLNLRGICCR*CYINPILHISFFITGHY 555
L YISKLNL ICC N IL +FF T HY
Sbjct: 14 LIXEYISKLNLSWICCWQRNFNTILFTTFFNTLHY 48
>UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5;
Sulfolobaceae|Rep: Quinol oxidase-2, cytochrome b -
Sulfolobus solfataricus
Length = 549
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTYRTR 291
I+++ITG + +YYT + + Y+ V YG + +LH+ GA +L L + TR
Sbjct: 90 ILEVITGALVALYYTPS--DPYTSTTYLISKVPYGAFLFSLHSWGAYAMVFL-LLVHMTR 146
Query: 292 N 294
N
Sbjct: 147 N 147
>UniRef50_A6C5Y3 Cluster: Cytochrome b/b6-like protein; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome b/b6-like
protein - Planctomyces maris DSM 8797
Length = 478
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 410 WGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
W TV + P +G L + I GG V +T+TRF+ H
Sbjct: 151 WSVTVAAEMAGRTPIIGPTLAHFILGGETVGGSTITRFFAMH 192
>UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter
violaceus|Rep: Cytochrome b6 - Gloeobacter violaceus
Length = 217
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Y LP Q ++W + NLL+ +P LG + + G V +A++ R + H
Sbjct: 141 YYLPLDQNAYWRLMIEANLLADVPVLGAAVKYFLLNGSGVSDASIARIHWLH 192
>UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=1; Triticum timopheevii|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Triticum timopheevi (Sanduri wheat)
Length = 207
Score = 34.7 bits (76), Expect = 2.4
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 242 MELHFFFICIYLHIGRGIYYESFNLKYV 325
++ FFI +YLHI RG+YY S+ ++V
Sbjct: 21 VDASMFFIVVYLHIFRGLYYASYPREFV 48
>UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus
rugulosus|Rep: Cytochrome b - Hoplobatrachus rugulosus
Length = 112
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 418 NRNYKSIICNPLFRNYISKLNLRGICCR*CYINPILHIS 534
N ++KS IC P++ + +NL + CR + N ILH+S
Sbjct: 2 NSHHKSSICGPIYWHRPRPMNLGWVFCRQRHANSILHLS 40
>UniRef50_Q8Z049 Cluster: Cytochrome b6; n=5; Cyanobacteria|Rep:
Cytochrome b6 - Anabaena sp. (strain PCC 7120)
Length = 212
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 398 QISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTFH 535
Q +W + + AIP +GT+L + + GG A+ + T+ YT H
Sbjct: 123 QEGYWRFNIELGNIEAIPAIGTLLRDILTGGGAISSLTVLHLYTLH 168
>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
apomucin, partial; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to submaxillary apomucin, partial -
Monodelphis domestica
Length = 745
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3
Query: 447 IADNRFVITVAPQKDI*PQGKT 382
+AD R ITVAPQKDI P G T
Sbjct: 1 MADRRLAITVAPQKDICPHGNT 22
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 33.5 bits (73), Expect = 5.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 380 YVLP*GQISFWGATVITNLLSAIPYLG 460
Y+LP Q+ FW TV TN+ A P LG
Sbjct: 173 YLLPDDQLGFWAVTVGTNMARATPLLG 199
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFY---LHLF 276
I + TG L YY + +AF + Y+ +V +G ++R +H GA LH+F
Sbjct: 82 ITLVFTGTLLMFYYHPSKVVAFRDILYLESDVPFGKLLRNMHRWGAHLMVIMVELHMF 139
>UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium
falciparum|Rep: Rps17 protein - Plasmodium falciparum
Length = 74
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -2
Query: 208 LHFGKYNLLYKKLFQYLLCNILLKIIQ**FELLDIKLVGILYFIKKKY 65
+ F KYN YKKL LLCN+ +KI E++ + Y+ K KY
Sbjct: 21 ISFYKYNFKYKKL---LLCNLYIKIYDNRNEIIINDYILFKYYKKSKY 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,365,797
Number of Sequences: 1657284
Number of extensions: 9197147
Number of successful extensions: 17536
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 16689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17410
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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