Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0880
(498 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27782| Best HMM Match : Borrelia_orfA (HMM E-Value=0.1) 32 0.23
SB_28166| Best HMM Match : Borrelia_orfA (HMM E-Value=2.1) 32 0.30
SB_57306| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_21743| Best HMM Match : rve (HMM E-Value=4e-17) 31 0.40
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 30 1.2
SB_27802| Best HMM Match : Filament (HMM E-Value=0.2) 30 1.2
SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 29 1.6
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 29 1.6
SB_59534| Best HMM Match : AA_permease (HMM E-Value=3.1e-05) 29 2.8
SB_9076| Best HMM Match : Gas_vesicle_C (HMM E-Value=0.9) 29 2.8
SB_51578| Best HMM Match : Hormone_5 (HMM E-Value=1.2) 28 3.7
SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08) 28 3.7
SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06) 28 3.7
SB_59010| Best HMM Match : rve (HMM E-Value=0.0052) 28 4.9
SB_36664| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_2284| Best HMM Match : Hormone_5 (HMM E-Value=0.46) 28 4.9
SB_32537| Best HMM Match : Met_10 (HMM E-Value=8.4e-10) 28 4.9
SB_53907| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-41) 27 6.5
SB_35067| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_46527| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_27782| Best HMM Match : Borrelia_orfA (HMM E-Value=0.1)
Length = 633
Score = 32.3 bits (70), Expect = 0.23
Identities = 28/89 (31%), Positives = 41/89 (46%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKKLWRPIVRNVLINRSR 253
K NT+ +T L+ T L+RTL Y P + RK + L+ R+
Sbjct: 120 KYNTSSLLTRT--LRKYNTSSLLTRTLRKYNTSSPLTRTSRKYNT-------SSLLTRAL 170
Query: 254 WRNNLRKELRRHTRSYGTSSLLFTTLKEN 340
++N L R R Y TSSLL TL+++
Sbjct: 171 RKHNTSSLLTRTLRKYKTSSLLTRTLRKH 199
Score = 31.5 bits (68), Expect = 0.40
Identities = 28/88 (31%), Positives = 42/88 (47%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKKLWRPIVRNVLINRSR 253
K NT+ +T L+ T L+RT+ Y +L R L+K R + L+ R+
Sbjct: 354 KYNTSSLLTRT--LRKYYTSSLLTRTMRKY--NTSSLLT-RTLRKTMRKHNTSSLLTRTS 408
Query: 254 WRNNLRKELRRHTRSYGTSSLLFTTLKE 337
+ N L R +R Y TSSLL T ++
Sbjct: 409 RKYNKSSLLTRTSRKYNTSSLLTRTSRK 436
Score = 31.5 bits (68), Expect = 0.40
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = +2
Query: 128 TKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNVLINRSRWRNNLRKELRRH 289
T L+RTL Y P + RK L + R + L+ R+ + N L R
Sbjct: 478 TSSLLTRTLRKYNTSSPLTRTLRKYNTSSLLTRTSRKYNTSSLLTRTLRKYNTSSLLTRT 537
Query: 290 TRSYGTSSLLFTTLKE 337
R Y TSSLL TL++
Sbjct: 538 LRKYNTSSLLTRTLRK 553
Score = 30.3 bits (65), Expect = 0.92
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = +2
Query: 128 TKGFLSRTLSVY*IKGPALQN*RKLKKLWRPIVRNVLINRSRWRNNLRKELRRHTRSYGT 307
T L+RTL Y P + RK + L+ R+ + N L R R Y T
Sbjct: 84 TSSLLTRTLRKYNTSSPLTRTLRKYNT-------SSLLTRTSRKYNTSSLLTRTLRKYNT 136
Query: 308 SSLLFTTLKE 337
SSLL TL++
Sbjct: 137 SSLLTRTLRK 146
Score = 30.3 bits (65), Expect = 0.92
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T M + T L+RTL Y + RK L + R +
Sbjct: 263 KHNTSSLLTRTMRKHN--TSSLLTRTLRKYNTSSLLTRTMRKYNTSSLLTRTMRKHNTSS 320
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 337
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 321 LLTRTMRKYNTSSLLTRTLRKYNTSSLLTRTLRK 354
Score = 29.1 bits (62), Expect = 2.1
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T L+ T L+RT+ Y + RK L + R +
Sbjct: 276 KHNTSSLLTRT--LRKYNTSSLLTRTMRKYNTSSLLTRTMRKHNTSSLLTRTMRKYNTSS 333
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 337
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 334 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 367
Score = 28.7 bits (61), Expect = 2.8
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T L+ T L+RTL Y + RK L + R +
Sbjct: 224 KYNTSSLLTRA--LRKHNTSSLLTRTLRKYNTSSLLTRTFRKHNTSSLLTRTMRKHNTSS 281
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKEN 340
L+ R+ + N L R R Y TSSLL T++++
Sbjct: 282 LLTRTLRKYNTSSLLTRTMRKYNTSSLLTRTMRKH 316
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 200 LKKLWRPIVRNVLINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 337
L + +R + L+ R+ + N L R +R Y TSSLL TL++
Sbjct: 49 LTRTFRKYNTSSLLTRTLRKYNTSSLLTRTSRKYNTSSLLTRTLRK 94
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 200 LKKLWRPIVRNVLINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 337
L + +R + L+ R+ + N L R +R Y TSSLL TL++
Sbjct: 443 LTRTFRKYNTSSLLTRTLRKYNTSSLLTRTSRKYNTSSLLTRTLRK 488
Score = 27.5 bits (58), Expect = 6.5
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T L+ T L+RTL + + RK L + R +
Sbjct: 172 KHNTSSLLTRT--LRKYKTSSLLTRTLRKHNTSSLLTRTLRKYNTSFLLTRTSRKYNTSS 229
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKEN 340
L+ R+ ++N L R R Y TSSLL T +++
Sbjct: 230 LLTRALRKHNTSSLLTRTLRKYNTSSLLTRTFRKH 264
Score = 27.5 bits (58), Expect = 6.5
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T L+ T L+RTL Y + RK L + R
Sbjct: 514 KYNTSSLLTRT--LRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRALRKDKTGS 571
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKEN 340
L+ R+ + L R R Y TSSLL TL+++
Sbjct: 572 LLTRTLRKYKTSSPLTRALRKYSTSSLLTRTLRKH 606
>SB_28166| Best HMM Match : Borrelia_orfA (HMM E-Value=2.1)
Length = 279
Score = 31.9 bits (69), Expect = 0.30
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = +2
Query: 128 TKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNVLINRSRWRNNLRKELRRH 289
T L+RTL Y P + RK L + R + L+ R+ + N L R
Sbjct: 124 TSSLLTRTLRKYNTSSPLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRT 183
Query: 290 TRSYGTSSLLFTTLKE 337
R Y TSSLL TL++
Sbjct: 184 LRKYNTSSLLTRTLRK 199
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 200 LKKLWRPIVRNVLINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 337
L + +R + L+ R+ + N L R +R Y TSSLL TL++
Sbjct: 89 LTRTFRKYNTSSLLTRTLRKYNTSSLLTRTSRKYNTSSLLTRTLRK 134
Score = 27.5 bits (58), Expect = 6.5
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T L+ T L+RTL Y + RK L + R
Sbjct: 160 KYNTSSLLTRT--LRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRALRKDKTGS 217
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKEN 340
L+ R+ + L R R Y TSSLL TL+++
Sbjct: 218 LLTRTLRKYKTSSPLTRALRKYSTSSLLTRTLRKH 252
>SB_57306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 31.5 bits (68), Expect = 0.40
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T L+ T L+RTL Y + RK L + R +
Sbjct: 30 KYNTSSLLTRT--LRKHNTSSLLTRTLRKYYTSSLLTRTLRKYNTSSLLTRTSRKYNTSS 87
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 337
L+ R+ + N R L R R Y TSSLL TL++
Sbjct: 88 LLTRTLRKYNTRSLLTRTLRKYNTSSLLTRTLRK 121
Score = 30.3 bits (65), Expect = 0.92
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T L+ T+ L+RTL Y + RK L + R +
Sbjct: 82 KYNTSSLLTRT--LRKYNTRSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSS 139
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 337
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 140 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 173
Score = 29.9 bits (64), Expect = 1.2
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T L+ T L+RTL Y + RK L + R
Sbjct: 43 KHNTSSLLTRT--LRKYYTSSLLTRTLRKYNTSSLLTRTSRKYNTSSLLTRTLRKYNTRS 100
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 337
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 101 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 134
Score = 29.5 bits (63), Expect = 1.6
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T L+ T L+RTL Y + RK L + R +
Sbjct: 108 KYNTSSLLTRT--LRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSS 165
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 337
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 166 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 199
Score = 29.1 bits (62), Expect = 2.1
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT +T L+ T L+RTL Y + RK L + R +
Sbjct: 95 KYNTRSLLTRT--LRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSS 152
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 337
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 153 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 186
Score = 29.1 bits (62), Expect = 2.1
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = +2
Query: 74 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RK------LKKLWRPIVRNV 235
K NT+ +T L+ T L+RTL Y + RK L + R +
Sbjct: 121 KYNTSSLLTRT--LRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSS 178
Query: 236 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLK 334
L+ R+ + N L R R Y TSSLL TL+
Sbjct: 179 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLR 211
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 221 IVRNVLINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKEN 340
++ + NR+ + N L R +R Y TSSLL TL+++
Sbjct: 5 VLHKLPANRTLRKYNTSSLLTRTSRKYNTSSLLTRTLRKH 44
>SB_21743| Best HMM Match : rve (HMM E-Value=4e-17)
Length = 865
Score = 31.5 bits (68), Expect = 0.40
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 91 IDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIK--EALETHCAKCTDKQKQMAKQ 264
+DD + EV + S + L+N PCT +L K++ + AK + +
Sbjct: 310 LDDCYFMGEVSTTNDEFWS-AEVLINHNPCTLKLDKLQRFNGMVNQLAKFIPDLATINEP 368
Query: 265 LAQGIKKTHPELWDE 309
L Q +KK LWD+
Sbjct: 369 LRQLLKKEQQWLWDQ 383
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 31.5 bits (68), Expect = 0.40
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 103 FDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKEALETHCAKCTDKQKQMAKQLAQGIK 282
FD+S V + +LK + + L GP +L++IKE +E H D+ KQ + +K
Sbjct: 5732 FDSS-VKTELHILKQFEENLRELGPIAEDLEEIKEQMEKH-RVFHDELKQEEVNVQSAVK 5789
Query: 283 K 285
K
Sbjct: 5790 K 5790
>SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
Length = 1640
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 175 PCTAELKKIKEALETHCAKCTDKQKQMAKQLAQGIKKTHPELW 303
P T E + +K+ L + + K + K LA GIK H LW
Sbjct: 1274 PATPEWRNLKKVLVPNLTN--NLPKNLPKNLANGIKNLHVRLW 1314
>SB_27802| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 528
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 184 AELKKIKEALETHCAKCTDKQKQMAKQLAQGIKKTHPE 297
+E+ +KE LE C KQK+ K + + KK H E
Sbjct: 281 SEINALKEQLEKECLNSETKQKRNEKSVDELKKKLHTE 318
>SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 187 ELKKIKEALETHCAKCTDKQKQMAKQLAQ 273
EL K+K+ALET +K+ +MA +LAQ
Sbjct: 560 ELDKVKKALETTQESWKEKETEMAAKLAQ 588
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/98 (23%), Positives = 42/98 (42%)
Frame = +1
Query: 76 DKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKEALETHCAKCTDKQKQM 255
D +E + + + + + N LL+S K + C A + IKEA E + K+
Sbjct: 1179 DAFESLKNQLERYKNIEN-LLLQSEAKNAETERTCEARITGIKEAYEQELENASASHKEA 1237
Query: 256 AKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLE 369
L Q IK+ + ++ I GK + ++ +E
Sbjct: 1238 LTALNQKIKQLSSDKEEKMIQI----GKLKRQVQELME 1271
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 188 N*RKLKKLWRPIVRNVLINRSRWRNNLRKELRRHTRSY 301
N RK++K RP++R + + S + +N R E+ R T Y
Sbjct: 121 NTRKIEKPPRPLIRIITVFSSNFYDNDRYEINRFTNYY 158
>SB_59534| Best HMM Match : AA_permease (HMM E-Value=3.1e-05)
Length = 889
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = -1
Query: 240 ISTFRTMGLQSFFNFLQFCSAGPLIQ*TLSVRLKKPFVTQDFRSIKAVIDWFVFVLSQY 64
+STF + L ++F+FL + + G I L +R +KP V + ++ + +I V +LS Y
Sbjct: 785 VSTFSS--LLNYFSFLTWVNYGATISGLLWMRYRKPDVHRPYK-VFILIPCLVLLLSLY 840
>SB_9076| Best HMM Match : Gas_vesicle_C (HMM E-Value=0.9)
Length = 305
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/40 (27%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +1
Query: 211 LETHCAKCTDKQKQMAK--QLAQGIKKTHPELWDEFITFY 324
+E AK + + +++ K +L++G+K + +WD+F ++Y
Sbjct: 112 MEQRVAKASQQIEELMKDFRLSEGLKTIYSLIWDDFCSWY 151
>SB_51578| Best HMM Match : Hormone_5 (HMM E-Value=1.2)
Length = 622
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 175 PCTAELKKIKEALETHCAKCTDKQKQMAKQLAQGIKKTHPELW 303
P E + +KE L + K + K LA GIK H LW
Sbjct: 280 PAIPEWRNLKEVLVPSLTN--NLLKNLPKNLANGIKNLHARLW 320
>SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08)
Length = 1185
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -2
Query: 281 LIPCASCFAICFCLSVHFAQWVSKASLIFFNSAVQGP*FS---KHLVYDLRSLSLLKTSE 111
++P ++ A CF Q+V SL+ SAV+ P FS +H Y L +SL+ T
Sbjct: 635 ILPASAVRAPCFSCVYRHQQYVLLISLVLQASAVRAPYFSCAYRHQQYVL-LISLVYTGI 693
Query: 110 ASKLS 96
+S S
Sbjct: 694 SSTCS 698
>SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06)
Length = 192
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 178 CTAELKKIKEALETHCAKCTDKQKQMAKQLAQGIKKTHPEL--WDEFIT 318
C L+K ++A+ET K K+ K GIK + +L +D F T
Sbjct: 29 CYTSLEKFEDAIETRPRGKIKKDKETEKYKTNGIKFAYNQLGGYDNFTT 77
>SB_59010| Best HMM Match : rve (HMM E-Value=0.0052)
Length = 935
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 136 LLKSYTKCLLNQGPCTAELKKIKEALETHCAKCTDKQKQMAKQLAQGIKKTHPE 297
L+ + C + G +A+ + +E E + +Q+A++LAQ K H E
Sbjct: 531 LIARHVDCRADTGTASADARSQREMGEPQGSTSAQPDEQLAQELAQEPGKQHQE 584
>SB_36664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 226 AKCTDKQKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKD 360
A K+K K LA +KK P+++D+ TFY+ ++ K+
Sbjct: 56 ALTAQKEKDFLKVLAM-LKKKDPKIYDKDATFYESDDSSSSNDKE 99
>SB_2284| Best HMM Match : Hormone_5 (HMM E-Value=0.46)
Length = 1266
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 175 PCTAELKKIKEALETHCAKCTDKQKQMAKQLAQGIKKTHPELW 303
P E + +KE L + K + K LA GIK H LW
Sbjct: 737 PAIPEWRNLKEVLVPSLTN--NLLKNLPKNLANGIKNLHVRLW 777
>SB_32537| Best HMM Match : Met_10 (HMM E-Value=8.4e-10)
Length = 397
Score = 27.9 bits (59), Expect = 4.9
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 80 NTNQSMTALMLLKS*VTKGFLS--RTLSVY*IKGPALQN*RKLKKLWRPIVRNVLINRSR 253
N++Q + L L+ +G L R L IK PA++ K ++R ++NVL+NR R
Sbjct: 7 NSSQDVENLFSLQKPELQGMLELDRDLFQKVIKLPAIRIDAKDCNIFRKKLQNVLLNRPR 66
Query: 254 WRN 262
+N
Sbjct: 67 LKN 69
>SB_53907| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-41)
Length = 686
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 255 HLLLFISTFRTMGLQSFFNFLQF--CSAGPLIQ*TLSVRLKKPFVTQDFRSIKAVID 91
H+L++ T R +GL +F + F C A + + V L + F F SI +D
Sbjct: 594 HVLIYFDTQRYLGLPMWFKLMCFWVCHANSAVSPCIFVSLSEKF-RHSFLSILRCVD 649
>SB_35067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 612
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 193 KKIKEALETHCAKCTDKQKQMAK---QLAQGIKKTHPELWDEFITFYDPQGKYQTSF 354
++IK L+ KC +K++ K +L + + L D+F+T D + T F
Sbjct: 60 ERIKLTLQAQRIKCAQLEKELGKMRAELERSSMQIDATLSDDFLTILDSADQKMTPF 116
>SB_46527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 118 VLSNERLLKSYTKCLLNQGPCTAELKKIKEALETHC 225
V+ ++++SY C+ +GP ELK K C
Sbjct: 51 VIKIHKIVRSYANCVAQKGPYEVELKADKRYSWCRC 86
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,503,509
Number of Sequences: 59808
Number of extensions: 244971
Number of successful extensions: 793
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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