Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0878
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0880 + 6903535-6903932,6904931-6905022,6905601-6905680,690...    28   8.1  

>01_01_0880 +
           6903535-6903932,6904931-6905022,6905601-6905680,
           6905885-6905926,6906001-6906128,6906530-6906710,
           6906801-6906979,6907469-6907717,6907950-6908193
          Length = 530

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 591 ASRSILFFERIFSAFRSDESIPVLSNFLDCSNKKS 695
           ASR+ ++F+RI S  +  E+ PV   F+D ++  S
Sbjct: 131 ASRTPMWFKRILSPLKKSENGPVFRFFMDLNDAVS 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,613,769
Number of Sequences: 37544
Number of extensions: 346732
Number of successful extensions: 640
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)