Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0878
         (845 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019830-1|AAH19830.1|   64|Homo sapiens PRO2012 protein protein.      32   3.0  
DQ141696-1|AAZ73087.1|  674|Homo sapiens NDC1 protein.                 31   6.9  
BC003082-1|AAH03082.1|  674|Homo sapiens transmembrane protein 4...    31   6.9  
AL354613-1|CAB89726.1|  673|Homo sapiens hypothetical protein pr...    31   6.9  
AL354612-1|CAB89725.1|  542|Homo sapiens hypothetical protein pr...    31   6.9  
AL049745-2|CAI22180.1|  674|Homo sapiens transmembrane protein 4...    31   6.9  
AK001269-1|BAA91592.1|  674|Homo sapiens protein ( Homo sapiens ...    31   6.9  

>BC019830-1|AAH19830.1|   64|Homo sapiens PRO2012 protein protein.
          Length = 64

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 508 LHYSSIKLNNNFS*SFACRLSSAPRGPMLSLMFLNILQHTIQYIE 374
           L  SS+ L N+FS SF C L +     +L++   NI   ++ Y +
Sbjct: 4   LFVSSVVLLNHFSYSFLCSLYTLDTNSLLAICIANIFSQSVAYFK 48


>DQ141696-1|AAZ73087.1|  674|Homo sapiens NDC1 protein.
          Length = 674

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +1

Query: 349 RKSFVKHFILYIGSCVVKYS-GTLERAWVREALTTVDMQMIKRNCYLV--LLMNNVANNI 519
           + S V+   L    C++ Y  G + +AW+  A+     + + R    V  LL  ++  ++
Sbjct: 214 KHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHV 273

Query: 520 WY*RLVSVTSNYIYNILLCIYCTKRH 597
           W   +  +T+ Y+  IL  IY T+ H
Sbjct: 274 WLCGVFLLTTWYVSWILFKIYATEAH 299


>BC003082-1|AAH03082.1|  674|Homo sapiens transmembrane protein 48
           protein.
          Length = 674

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +1

Query: 349 RKSFVKHFILYIGSCVVKYS-GTLERAWVREALTTVDMQMIKRNCYLV--LLMNNVANNI 519
           + S V+   L    C++ Y  G + +AW+  A+     + + R    V  LL  ++  ++
Sbjct: 214 KHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHV 273

Query: 520 WY*RLVSVTSNYIYNILLCIYCTKRH 597
           W   +  +T+ Y+  IL  IY T+ H
Sbjct: 274 WLCGVFLLTTWYVSWILFKIYATEAH 299


>AL354613-1|CAB89726.1|  673|Homo sapiens hypothetical protein
           protein.
          Length = 673

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +1

Query: 349 RKSFVKHFILYIGSCVVKYS-GTLERAWVREALTTVDMQMIKRNCYLV--LLMNNVANNI 519
           + S V+   L    C++ Y  G + +AW+  A+     + + R    V  LL  ++  ++
Sbjct: 213 KHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHV 272

Query: 520 WY*RLVSVTSNYIYNILLCIYCTKRH 597
           W   +  +T+ Y+  IL  IY T+ H
Sbjct: 273 WLCGVFLLTTWYVSWILFKIYATEAH 298


>AL354612-1|CAB89725.1|  542|Homo sapiens hypothetical protein
           protein.
          Length = 542

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +1

Query: 349 RKSFVKHFILYIGSCVVKYS-GTLERAWVREALTTVDMQMIKRNCYLV--LLMNNVANNI 519
           + S V+   L    C++ Y  G + +AW+  A+     + + R    V  LL  ++  ++
Sbjct: 214 KHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHV 273

Query: 520 WY*RLVSVTSNYIYNILLCIYCTKRH 597
           W   +  +T+ Y+  IL  IY T+ H
Sbjct: 274 WLCGVFLLTTWYVSWILFKIYATEAH 299


>AL049745-2|CAI22180.1|  674|Homo sapiens transmembrane protein 48
           protein.
          Length = 674

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +1

Query: 349 RKSFVKHFILYIGSCVVKYS-GTLERAWVREALTTVDMQMIKRNCYLV--LLMNNVANNI 519
           + S V+   L    C++ Y  G + +AW+  A+     + + R    V  LL  ++  ++
Sbjct: 214 KHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHV 273

Query: 520 WY*RLVSVTSNYIYNILLCIYCTKRH 597
           W   +  +T+ Y+  IL  IY T+ H
Sbjct: 274 WLCGVFLLTTWYVSWILFKIYATEAH 299


>AK001269-1|BAA91592.1|  674|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10407 fis, clone NT2RM4000520. ).
          Length = 674

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +1

Query: 349 RKSFVKHFILYIGSCVVKYS-GTLERAWVREALTTVDMQMIKRNCYLV--LLMNNVANNI 519
           + S V+   L    C++ Y  G + +AW+  A+     + + R    V  LL  ++  ++
Sbjct: 214 KHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHV 273

Query: 520 WY*RLVSVTSNYIYNILLCIYCTKRH 597
           W   +  +T+ Y+  IL  IY T+ H
Sbjct: 274 WLCGVFLLTTWYVSWILFKIYATEAH 299


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,264,526
Number of Sequences: 237096
Number of extensions: 2074025
Number of successful extensions: 6194
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6194
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)